Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0914 ATGGATGACTCCTCAGAGGTATCCAGTATACCTTCTGATTATGAGGATTGCATAGAGGAACAACGACCCTCCTGTTGTAGCTTTGAAGAAGCTATTGAGTTGATGCAGTCTAGGAATGGAGAACAAGAAATGCCAGAGAACCTGCAGGGGGGCATTCTTCTTGATCAGACATATATTGTGGCATCTAAAGTTCTTAATATGCTTCTCTTTGCACCCAATTCACAGTTCAGGCAAGATCTGGCAGAACTTCAGAGAACAACAAACATGAAAGAGGGGCCTTGGACTTGGAAATCAGGGGCGTTGTCATGTTTAACACGAGTTGTTAGCTATACACAAGCTGCAACGAAATTAGTCAAGGCTGTTGACGCCTTGGAGGAGCAAACATATATTAAAGCAGATGGTAGAGAATTTGCTGTCTTGGTAAATGTGGATACTCCAGATGTTCCATATGGAAATTCATTCAAGGTTGAGTTGCTTTACAAAATAATGCCTGGACCGGAGCTATCTTCAGGAGAAGAATCCTCTCATCTTGTAGTGTCCTGGGGTCTGAGCTTTTCCCAGAACACAATAATGAGAGGCATGATTGAAGGAGGAGCTCGGCAGGGATTGAAGGAGAGTTTTGACCAGTTTGCAAATCTGCTTGCTCAGAATTTTAAGACGCTGGGTTCCATAGATTCATTAGACAAAGATCAGATGTTGGCAACTTTGCAAACAGAGCAACAGTCAGATTGGGAGTTGGCAACTGAGTACTTCGGGAATTTCACTGTAGTTTCTGCCTTTTTTATGGTCATTTATATCCTGGTGCACATTCTACTCTCTGTTCGTAGTGAACAACAAGGCTTGGAATTCAGTGGTCTTGATTTACCTGACAGTTTTGGGGAGCTTATCACTTGTGGAATTCTAGTCATTCAATTGGAGCGTGTTTATGCCATGATATTACATTTTGTGCAAGCTAGATTCCAAAGAGGAAGTGATCATGGTGTCAAAGCCCAAGGTGATGGATGGGTGCTTACTGTTGCATTGATCGAGGGGATTAATTTAGCTTCCTTGGATTCAACTGGGTTATCAGATCCCTATGTGGTTTTCACCTGCAATGGTAAAACAAGAACAAGCTCTGTCAAGCTTCAAACTCATGATCCTCAGTGGAATGAGATACTTGAGTTTGATGCTATGGAAGAGCCTCCTGCAGTGCTCGATGTGGAAGTTTTTGATTTTGATGGCCCATTTGATGAGGCAGCCTCACTTGGACATGCTGAAATCAATTTCCTAAGACATACTTCTACAGAACTGGCAGACATGTGGGTCTCCCTTGAAGGAAAGCTTGCTCAGTCATCACAGTCAAAGTTACACTTGAGAATTTTTTTGGACAATAACAATGGAGTTGAAACAATTAAAGAGTATTTAGCAAAGATGGAGAAGGAAGTTGGAAAGAAGATAACCCTCCAGTCACCTCACAGGAATTCAACATTTCTGGCACTGTTTGGATTGCCACCAGAAGAATTTCTTATCAATGACTTCACATGCTACCTGAAGCGAAAAGTGCCTTTGCAGGGTCGACTCTTTCTGTCTGCAAGAATTGTTGGGTTTTATGCCAACTTGTTTGGACACAAAACCAAATTTTTCTTTCTTTGGGAGGATATTGAAGATATTCAAGTTCATCCCCCATCCCTAGCATCTTTGGGTAGCCCTTCGCTGGTGATAATTCTGCGGAAAGGTCGAGGTCTTGATGCTAGGCATGGTGCAAAGTCTCAAGATGAAGAAGGAAGGCTGAAATTCTATTTTCAATCATTTGTGTCGTTCAATGTAGCCAGCAGGACGATTATGGCCTTGTGGAGAACAAGAACATTGACCCCAGAGCAGAAAGCACAAATTGCAGACGAGCAGCAGGATGAAGATGGGAGTTCTCTTCTTCTTGAAGACCCTGGATCTGTTTTCAATGTTGAAGAGGCAAAGATGTCCAAAGTTTACTCTGCGGAACTCCCTATTGATATAAAATCACTGATGGAAATGTTTGATGGAGGAAACTTGGAGCACAAAATTATGGAAAAGTCAGGCTATCTAAATTACAAGGCTACTGGTTGGGAAACTGTAAAGCCTGACCTATATGAACGACATCTCTGTTTCAAATTCAACCGCCATGTCTCAATCTTTGGAGGGGAAGTTACCTGCACACAGAAAAAATCTCCTATTGGAAATGACAATGGTTGGATTCTGAATGAGGTTATGGCTCTACACGATATCCCATTTGGTGACCATTTCCGGGTACATTTTAGGTACCAGATTGAGAACTTTGGCCTTGCTCCTGGTAAATGTAAATGCGAGGTCCACATGGAGATACTGTGGCTGAAAAGCACGGTTTTCCAGCAGAGAATCACTAGAAACATAACCGAAAAGTTCACGAGTAGATTGAAGGAAATAATTGAACTGGTTGAGAGAGAGGCTCTACTGAATTGCCCACAAGATAGTTCCCCCTGA 2475 0.4234 MDDSSEVSSIPSDYEDCIEEQRPSCCSFEEAIELMQSRNGEQEMPENLQGGILLDQTYIVASKVLNMLLFAPNSQFRQDLAELQRTTNMKEGPWTWKSGALSCLTRVVSYTQAATKLVKAVDALEEQTYIKADGREFAVLVNVDTPDVPYGNSFKVELLYKIMPGPELSSGEESSHLVVSWGLSFSQNTIMRGMIEGGARQGLKESFDQFANLLAQNFKTLGSIDSLDKDQMLATLQTEQQSDWELATEYFGNFTVVSAFFMVIYILVHILLSVRSEQQGLEFSGLDLPDSFGELITCGILVIQLERVYAMILHFVQARFQRGSDHGVKAQGDGWVLTVALIEGINLASLDSTGLSDPYVVFTCNGKTRTSSVKLQTHDPQWNEILEFDAMEEPPAVLDVEVFDFDGPFDEAASLGHAEINFLRHTSTELADMWVSLEGKLAQSSQSKLHLRIFLDNNNGVETIKEYLAKMEKEVGKKITLQSPHRNSTFLALFGLPPEEFLINDFTCYLKRKVPLQGRLFLSARIVGFYANLFGHKTKFFFLWEDIEDIQVHPPSLASLGSPSLVIILRKGRGLDARHGAKSQDEEGRLKFYFQSFVSFNVASRTIMALWRTRTLTPEQKAQIADEQQDEDGSSLLLEDPGSVFNVEEAKMSKVYSAELPIDIKSLMEMFDGGNLEHKIMEKSGYLNYKATGWETVKPDLYERHLCFKFNRHVSIFGGEVTCTQKKSPIGNDNGWILNEVMALHDIPFGDHFRVHFRYQIENFGLAPGKCKCEVHMEILWLKSTVFQQRITRNITEKFTSRLKEIIELVEREALLNCPQDSSP* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0914 824 Pfam C2 domain 336 437 IPR000008 -
Vvi17g0914 824 ProSiteProfiles VASt domain profile. 651 814 IPR031968 -
Vvi17g0914 824 CDD C2 337 437 - -
Vvi17g0914 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 335 460 IPR035892 -
Vvi17g0914 824 PANTHER BNAA05G37250D PROTEIN 2 815 IPR044511 -
Vvi17g0914 824 ProSiteProfiles VASt domain profile. 49 222 IPR031968 -
Vvi17g0914 824 Gene3D C2 domain 319 455 IPR035892 -
Vvi17g0914 824 ProSiteProfiles C2 domain profile. 322 435 IPR000008 -
Vvi17g0914 824 Gene3D - 486 613 IPR011993 -
Vvi17g0914 824 SMART C2_3c 336 435 IPR000008 -
Vvi17g0914 824 Pfam VAD1 Analog of StAR-related lipid transfer domain 655 796 IPR031968 -
Vvi17g0914 824 Pfam VAD1 Analog of StAR-related lipid transfer domain 53 202 IPR031968 -
Vvi17g0914 824 Pfam GRAM domain 492 562 IPR004182 -
Vvi17g0914 824 SMART gram2001c 488 554 IPR004182 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0914 337 439 Acyl Lipid Metabolism Gene Families AT4G13550 30.097 3.97e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0914 - - vvi:100262229 1635.93