Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0909 ATGGCAAAAGCTACTCTTCTGATTCTCAAATTGTTGATGATCCTAATATGTGCTGGTTGGATTACTCTCTGGATCCTGAAGCCCACCCAACTGTGGACGAAAAAATGGCATACTGCTGAAGATAGTGCGAGAACCACAGTGTTTGGGTACTATGGTCTTAATTTTGTTGTATACACCTTTCCTGTTATTGCTCTGGCTGCAATTGGATTTGTTTACTTGGATTTGCAGTCTAGAGAGTCAAGAAGAAGACAAGCAAGAAGATCAGCCTCAGTTCTTTCCAATCCCCTCGTTGTTAACAATTACCTGGGTGTTCTATCAGCCCTTGAGATTTTAGCAGTGTCCCTCTTCTTCCTCTATCTGGCATGGACTTTCTATGTTCACATCTCCAATGATTTCGAGAAAATGGTACCAGCCAAATCATTGAAGTCCTACTCCACCATCTCCAATGCTGGCAAGAAGATGACCCCAGCTGAATCATTGAAGCTGAATACGCGGCAGTTCAAATTCCTTAGGGTGGCAACGCGATTTGGTTTGCTGGCAGAAGCCTGCCTGGCTCTGCTACTACTGCCTGTCTTAAGGGGGATGGCCTTGTTTCGGTTTGTTGGCGTACAGTTTGAAGCATCAGTAAGATACCATGTCTGGCTTGGGACTGCAATGATATTTTTTGCCACTTTTCATGGTGTAAGCACCCTTATTGTTTGGGGGATCAAAGACCGGATTCAGGATGAGATGGGAAAATGGCAGAAAACAGGCCGGATTTATCTAGCTGGGGAGATTGCTCTCGTTACAGGCCTAGTTATCTGGATTACGTCACTTCCTCCAATAAGGCGGAAACGGTTTGAAATCTTCTACTACACTCACCACCTGTACATAGTCTTCCTACTATTCTTCTTGTTCCATGGCGGAGATCGTCACTTTTATATGGTTTTTGGTGGGGTTTTTCTGTTTGGCCTTGACAAGCTACTTCGAATCATACAATCAAGACCACAGACTTGCATCCTGTCAGCAAGAGTATTCCCCTGCAAAGCTATAGAGCTTGTTGTAGCAAAAGATCCAGGATTGAAGTATGCCCCAACAAGCATCATATTCATGAAGATACCAAGCATTTCCAGATTTCAGTGGCATTCCTTCAGTATAACTTCCAGCTCAAACATTGATGATAATACTATGTCTGTCATAATCAAATGTGGAGGATGGTGGACAAACTCCCTGAGTGACATAATACATGCTGAGCTAGACTCAGGTTCCAATCAGATGAAGTGCATCCCAATTGCAATTGAAGGCCCTTATGGACCTGCCTCACTGGACTTCTTAAGCTATGAAAGTCTACTTCTGGTAGCCGGAGGAGTTGGGATAACCCCATTTCTGAGCATTTTGCAGGAAATTACTTCCACACAGAGCAGCATCAGATATAGATTCCCCAGAAGAATTGAACTTTTATATATTATGAAGAAATCCCAAGATATATGTCTGTTAAACCCGATATTGCATCTACTCCAGAACCAGTTAGCTGAACAATGGCATCTAAAGCTAAAAGTGTTTGTAACCCAAGAAGAAGAATGTGGTGCAACCATAAGAGATCTTCTGAATGAGTTTTGTCAAGTCCAAGTAGTAAACTTTGCCTCAAAATGTTCGAGTTATGCAGCAAATGGACTTGAAAATTTGCTTTGGATGGCTGCCATGGCTGGGTTTTCCTCAGTCATGTTCCTTGTTTTTCTTTCTTCTCTCAACCATGCCTTTCTTCCTTCCCAAGATAAGTCCTCCAAAGAGAAAAGCCCTTCTTGGGTTGCTGACATACTTCTCATATGTTCCTTCATCATAGCTATTCTATGCAGCACCATAGTGGCAATTGTCTTGAGATGGAGAAAGCTGAGAAGAGAGATTCCACCAGTCTCTCAAAAGGAAGGCAAAGCCAAGGAGGGTTTGATGGACACAAGGGGCACTGCTCTTGAGGAGCATGAAATCCATTTTGGAGGAAGGCCTAATTTCCAAGATATATTTTCCAAGTTTCCAAAAGAAACTCGTGGATCGAATATAGGAGTCCTGGTTTGTGGCCCGGAAACAATGAAAGAATCAGTGGCATCAATATGCAGTCAAACCTCCCAATGCTGCAACATGGGAAATGATCAGAAAAGGAAGTCACACTTCAGTTTCCACTCCCTCAACTTCACACTCTAG 2178 0.4302 MAKATLLILKLLMILICAGWITLWILKPTQLWTKKWHTAEDSARTTVFGYYGLNFVVYTFPVIALAAIGFVYLDLQSRESRRRQARRSASVLSNPLVVNNYLGVLSALEILAVSLFFLYLAWTFYVHISNDFEKMVPAKSLKSYSTISNAGKKMTPAESLKLNTRQFKFLRVATRFGLLAEACLALLLLPVLRGMALFRFVGVQFEASVRYHVWLGTAMIFFATFHGVSTLIVWGIKDRIQDEMGKWQKTGRIYLAGEIALVTGLVIWITSLPPIRRKRFEIFYYTHHLYIVFLLFFLFHGGDRHFYMVFGGVFLFGLDKLLRIIQSRPQTCILSARVFPCKAIELVVAKDPGLKYAPTSIIFMKIPSISRFQWHSFSITSSSNIDDNTMSVIIKCGGWWTNSLSDIIHAELDSGSNQMKCIPIAIEGPYGPASLDFLSYESLLLVAGGVGITPFLSILQEITSTQSSIRYRFPRRIELLYIMKKSQDICLLNPILHLLQNQLAEQWHLKLKVFVTQEEECGATIRDLLNEFCQVQVVNFASKCSSYAANGLENLLWMAAMAGFSSVMFLVFLSSLNHAFLPSQDKSSKEKSPSWVADILLICSFIIAILCSTIVAIVLRWRKLRREIPPVSQKEGKAKEGLMDTRGTALEEHEIHFGGRPNFQDIFSKFPKETRGSNIGVLVCGPETMKESVASICSQTSQCCNMGNDQKRKSHFSFHSLNFTL* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0909 725 Gene3D - 583 723 IPR039261 -
Vvi17g0909 725 Gene3D - 424 554 IPR039261 -
Vvi17g0909 725 FunFam ferric reduction oxidase 8, mitochondrial 424 561 - -
Vvi17g0909 725 Pfam FAD-binding domain 334 434 IPR013112 GO:0016491
Vvi17g0909 725 Pfam Ferric reductase like transmembrane component 177 297 IPR013130 -
Vvi17g0909 725 CDD NOX_Duox_like_FAD_NADP 333 522 - -
Vvi17g0909 725 FunFam Uncharacterized protein 574 723 - -
Vvi17g0909 725 SFLD Ferric Reductase Domain 29 725 - -
Vvi17g0909 725 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 424 698 IPR039261 -
Vvi17g0909 725 PANTHER NADPH OXIDASE 11 723 - -
Vvi17g0909 725 Pfam Ferric reductase NAD binding domain 440 698 IPR013121 GO:0016491
Vvi17g0909 725 SFLD Ferric reductase subgroup (FRE) 6 724 - -
Vvi17g0909 725 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 317 436 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0909 Vvi-Chr17 10745437 10748335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0909 197 725 Miscellaneous Gene Families AT5G50160 48.741 3.63e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0909 K00521 - vvi:100241516 1412.9