Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0900 ATGAGATCAACTCCTCTCGGGTTGGCTTCCCATCAAATTCGACCGTTTACCTTGCCCCCAGTTCAAGTTTCCCTCCATTTTCTCCCCAGGGCTCCTCTAAACCTCAAACTCTATCCCAAAACCCCATCTCCAAGTCGCTTCCACCCAATAACAGCCAAAGCCCAACACACCCACCTCTCCACCCACCAAACCAGGACCCAGGACGATGGCATCCCAGTCGACCTCGTTAAAATCCTTGTGAAATTCAAGTCCAGACACAACTACATCAGGGTTCTAGACGTTTCTAGAAAGGCCGACCACCCATTTGCCGGCTCTAGACTCCTCCTCCTGGATGGTCCCGGAAACATTCACAGCATATCTTTCCTATTGAAATCGTTCACTGATACTTACTTCGATGTCTTGGCGACATTACCGGCCATTCTGCCTCCTGGGCCATTGGGAATTCTTGGTTTTGGGGCAGGCTCTGCAGCTCGTTTGATCCTAGAAACCTATCCACAAGTAGTGGTTCATGGGTGGGAGCTTGACCCGTCTGTGATTGAAGTGGGTAGAGAGTATTTTGGCCTTTCGAAGCTTGAAAAAGAGCACCCACATAGGCTTTTCATCTACATTGGTAATGCGTTGAATGCAAGCGTTAGAAATGGGTTTTCGGGGATTTTGGTTGATTTGTTTTGTAAGGGTAGTTTGATACCGGAGCTTCAGGATCCAGGGACTTGGGAGAAGTTGAGGAAGAGGTTGAGGAAGGGTGGGAGGATTATGGTTAATGTTGGAGGGAGTTGTGTTGAGGCAGAGGATTCAAGGAGAGATGGGAAGGTGGTAATGGAGGAATCATTGAAGGCAATGCATAAGGTCTTTGGTGATCAGGTTTTTGTTTTGAATCTCGGGAACAGGAAGGAGGATAGCTCCATTGCTCTCACCGGCGAATTGCCCGATCTTGATGAATGGAAGAAAGCTCTTCCCCGATCTTTAAGAAGCATTCAGGAGCAGTCTACTGATGCAGTTCATATATTTGTGTTTATTCCTGTTAGAAGCAATGTTTTTTTTTTTCCCTGGATTGTGCAAAGCTTATTTATGAGGTTTGAACTTTTCTCCCACCTAAAATCATCCTCTCTTTTGTCTCTTTGTTCTCGATTGGTTCATTAG 1140 0.464 MRSTPLGLASHQIRPFTLPPVQVSLHFLPRAPLNLKLYPKTPSPSRFHPITAKAQHTHLSTHQTRTQDDGIPVDLVKILVKFKSRHNYIRVLDVSRKADHPFAGSRLLLLDGPGNIHSISFLLKSFTDTYFDVLATLPAILPPGPLGILGFGAGSAARLILETYPQVVVHGWELDPSVIEVGREYFGLSKLEKEHPHRLFIYIGNALNASVRNGFSGILVDLFCKGSLIPELQDPGTWEKLRKRLRKGGRIMVNVGGSCVEAEDSRRDGKVVMEESLKAMHKVFGDQVFVLNLGNRKEDSSIALTGELPDLDEWKKALPRSLRSIQEQSTDAVHIFVFIPVRSNVFFFPWIVQSLFMRFELFSHLKSSSLLSLCSRLVH* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0900 379 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 64 257 - -
Vvi17g0900 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 288 IPR029063 -
Vvi17g0900 379 Gene3D Vaccinia Virus protein VP39 86 333 IPR029063 -
Vvi17g0900 379 FunFam S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 86 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0900 Vvi-Chr17 10612824 10614033 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0900 - - vvi:100263889 617.846