Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0889 ATGGCGGAAGAGCCGGATTATCAGTACGATGAAAGCATCTTCAAGTGGGACGAAAAATCTCAACTATACTTCCATCCCAGTAGTGGCTTTTATCATGATCCGAATGCTGGATGGTACTACAGCAGTAGAGACGGTCTGTACTACAAATTTGAGGATGGGAATTATGTCCTCTTGGATTCTCAGAAGGTTCAGGGTGATGAATGTGCAATAGATGAGGGTGGGGAAGTTCTTCCTGGTAATACCATTCAGGATGAGCAATGTACAAATTCATATTGCTGGAATGATGAGTATTACTCTTCATTTCAGGGAGATGAATCCGAGGGCATGGGAACTGCTGCTGATGAATGCACTCCAGGGCATACAACATGTGTTAGCAGTCATGATGCAGAAAATCCACCCCCACCATCAGAATGGCTTGAAGACACACTTATTGATCTATATTTGTCTGGTTATTCCACAACAGCAATCAATGCTACCGATGAAGTGAGGATGCCTTTGGAAACAGATGAGGGGGATAACTTTAAGTTGTCAGCTCATGGAAATGGTGATGATCATGAGCTAGAAGGCGAATGCGTTCTAGAGGATCATCATGGTGTAACAGATTCAATTGGAAATGTTGTAGCCAAAGGTGATTCCTGGGATGAAGAGAACTGGCGAGCACAGTATGGTCAAGTTATTAAATCTGAGGATTCCATTCCAAACTTTCCAGTTGTGGATCTATGGGATTGGGCAATGGTGTCAGGTGTCAAAAAGGATGGAAAAGGACAAGTGGCCAGGTTGGTTGGGCGGCTAGTGAGGCAATCCACTAAGCTTCATCCCTCTATGCCTTCTGGTGGTGGTCTTATGAAAACTGCCCCAATATGTGAAGTGCATCTTGATCTGGTACGAGTAACATCAGGGCAGGTTTATAGGTTGAAGAGTCCTAGCTCAAGATATTTAGCTTCCTTGTCAATTTATGATTCTTCCAACCCAACAAAAGACTGGAGCTTTCCCAAATTGTCAGTTGATCAGAATATGCTTCCTCTATCTAAATGCCGAAATAGTGAATCCAAAGTGACAGATGGTGTTGCTATTCAGAAGGATTTATCTGTGCTACAGGATCCAAAGTCTGCATCTGACAAGCATAAAAGCCACGTGTATAGGGATAGAGCTGCAGAGAGAAGAACTTTGCATGGAGGTTTTGGTGTGGGTCCTGGACAAAAGAATTTGGTTGTTGGAGATGCTATGCCATCATCTCCTGTTTCTGTCTCAACAGAAGAAGCTGCAGCTGAAGCCTTGAACATGTCCTTTGGAGCTGGTAGTTATGCTAGAAGAATTCTAGAAAGCATGGGTTGGAAGGAGGGAGAGGCACTTGGCAACACCGCAAAGGGTCTACTGGAACCATTAGAAGCAGTTGCAAACAGAGGAAATGCTGGATTGGGTTGGATCCATAGCAGAATGAAACACAACTGA 1452 0.4394 MAEEPDYQYDESIFKWDEKSQLYFHPSSGFYHDPNAGWYYSSRDGLYYKFEDGNYVLLDSQKVQGDECAIDEGGEVLPGNTIQDEQCTNSYCWNDEYYSSFQGDESEGMGTAADECTPGHTTCVSSHDAENPPPPSEWLEDTLIDLYLSGYSTTAINATDEVRMPLETDEGDNFKLSAHGNGDDHELEGECVLEDHHGVTDSIGNVVAKGDSWDEENWRAQYGQVIKSEDSIPNFPVVDLWDWAMVSGVKKDGKGQVARLVGRLVRQSTKLHPSMPSGGGLMKTAPICEVHLDLVRVTSGQVYRLKSPSSRYLASLSIYDSSNPTKDWSFPKLSVDQNMLPLSKCRNSESKVTDGVAIQKDLSVLQDPKSASDKHKSHVYRDRAAERRTLHGGFGVGPGQKNLVVGDAMPSSPVSVSTEEAAAEALNMSFGAGSYARRILESMGWKEGEALGNTAKGLLEPLEAVANRGNAGLGWIHSRMKHN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0889 483 Pfam G-patch domain 435 474 IPR000467 GO:0003676
Vvi17g0889 483 ProSiteProfiles G-patch domain profile. 432 478 IPR000467 GO:0003676
Vvi17g0889 483 CDD OCRE 10 53 - -
Vvi17g0889 483 Pfam OCRE domain 10 52 IPR041591 -
Vvi17g0889 483 PANTHER RNA-BINDING PROTEIN 10 482 - -
Vvi17g0889 483 SMART G-patch_5 430 476 IPR000467 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0889 - - vvi:100245077 991.875