Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0888 ATGTCCATGGCTTCTCTCCCCCACATCGATGATGATGATGATTTCGGAGGCGATTTCTCTGGAGGCCACAATGGCAGGCGTTCAGGGAATAAGAGAGGCTTTGGAGATCTTGAGGATGACGAAGACGATATTTTTAGCAACAAGAAGGGAAGCTTCAAACTTGAAGAAACTGCTCCTGGAGTTGCGACAGGAATGATTTTGTCTCTCCGTGAGAGTCTTCAAAACTGTAAGGATACTCTAGCAACATGCCAAACGGAGCTTGAAGCTGCAAGGTCAGAGATTCAAAAGTGGCATTCTTCATTTCAGAATGATTCCTTCATACCAGCAGGCACATCTCTTGAACCTAAACTAGTGGTCAACTATCTTCAGACTCTGAAATCCTCTGAAGAGTCATTGAGAGAACAGCTAGAAAAAGCAAAGAAAAAGGAAGCTGCTTTCATTGTAACATTTGCTAAACGGGAGCAGGAGATTGCAGAATTGAAGTCTGCAGTCCGGGATTTGAAAGCACAACTGAAGCCACCATCAATGCAGGCAAGGAGGTTATTACTAGATCCAGCAATTCATGAAGAGTTCACACGTTTAAAGAATTTGGTTGAGGAGAAGGAAAAAAAAGTGAAGGAGTTGCAGGATAATGTTGCTGCTGTCAATTTTACTCCACAAAGCAAGATGGGGAAGATGCTAATGGCAAAATGCCGAACCCTGCAGGAGGAAAATGAGGAAATTGGAAATATAGCTTCTGAGGGAAAGATGCATGAATTAACAATGAAACTTGCTTTGCAAAAATCTCAAAATGCAGAGCTCAGAAGTCAATTTGAAGGACTGTACAAACATATGGAGGGACTGACCAATGATGTGGAAAAGTCAAACGAAATGGTGCTAATCTTGCAAGAGCAGTTAGAAGAGAAGGATTCGGAGCTCAAAAGGCTGAAGGAAGAGCTGGAGCAGAAGACGCAAATGGAAGCTGAAAATAATGATTCAGCTTCCGATAAGAAAGTTAGTGATGATGCAACGATACCTGTGGAAGATGGAAACTGA 1035 0.4242 MSMASLPHIDDDDDFGGDFSGGHNGRRSGNKRGFGDLEDDEDDIFSNKKGSFKLEETAPGVATGMILSLRESLQNCKDTLATCQTELEAARSEIQKWHSSFQNDSFIPAGTSLEPKLVVNYLQTLKSSEESLREQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPSMQARRLLLDPAIHEEFTRLKNLVEEKEKKVKELQDNVAAVNFTPQSKMGKMLMAKCRTLQEENEEIGNIASEGKMHELTMKLALQKSQNAELRSQFEGLYKHMEGLTNDVEKSNEMVLILQEQLEEKDSELKRLKEELEQKTQMEAENNDSASDKKVSDDATIPVEDGN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0888 344 Coils Coil 73 93 - -
Vvi17g0888 344 Coils Coil 191 218 - -
Vvi17g0888 344 Coils Coil 250 270 - -
Vvi17g0888 344 Coils Coil 278 330 - -
Vvi17g0888 344 MobiDBLite consensus disorder prediction 1 42 - -
Vvi17g0888 344 Coils Coil 122 145 - -
Vvi17g0888 344 MobiDBLite consensus disorder prediction 316 344 - -
Vvi17g0888 344 Pfam WTAP/Mum2p family 138 292 IPR033757 GO:0000381|GO:0005634|GO:0080009
Vvi17g0888 344 Coils Coil 150 170 - -
Vvi17g0888 344 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 30 322 IPR033757 GO:0000381|GO:0005634|GO:0080009
Vvi17g0888 344 MobiDBLite consensus disorder prediction 316 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0888 K22824 - vvi:100246679 603.594