Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0885 ATGCAGAGCAAAGTGGAGCAATCTGCACGGACCAAAATGCAGGAGCTGCGATTGATCTGTGACAAGGAGATTCCGATTCAGCAGCAGAAAATTGACTCCGCGGTGCTTTCGTTTCGGAGATCTCTGGAGACGCTCCAGTCCAAAGCACATAAAACGGTCGAAAATCAAGTAAAACTAGGAAAGCTTAAAGCTCAATTAAGAGAGATGGAGGATGATTTGGTGAAAGCTCTAGCAGTGAAGACACGTAAAGAGGCCAAGAAGATGGCTATAATGGACTCAATTTCTGCTACAAAGGCTAAAATAGAAGAGCTTAAGAGAATTGTTGAAGAGCACAAAGCTAGAAAAGATCAATGTGCAGCAATAATATCTCAACAAGATATAGCTTTGGCAACATATGAAGGAAAGGGTGACCAAGTCACTGGACGTAGAGAAGAAATACAAGAGGCCATTGCTTGGTACAATGAGGTCCTTGGTTTTCAAATTGAAGGTGGACATGGAGTTAAATTCATATTCACCAACATCAACTCGAAAAACCCAAGTGAGGAGTATTCTTTCACCATCCGCCATGCAAACGATACTTACACCTTACTGGATTGCAGTCCACACTTGAATGACATCAAAGAGTTAATCCATGAGTTGAATAGAACGAATGGTTTATTCAAATTTGTCAGAATTATGAGAGAGAAGTTCCAAAAAGCTGCTGAATTTGGAGTTCTGCCTCAATTTACACCTCTTCATCAACACTCTTCCACAATCTCCATTTCTGCTCCAGTTTCTTCAGTTTCAACTGATAATAGAGATGAATCTCCAGCTGAGAAAAATGAGCTTCAAATTAAACATGAACGAACCAACTGGCATTCTGAGAAAGCTATTCATGAAGGGGGTAGACATGCATTTCTGTCTCCTGGATCTGCATTATCTCTTCGTCGATCCCCTCGATTTCAGGTTAGAAAATGA 957 0.4086 MQSKVEQSARTKMQELRLICDKEIPIQQQKIDSAVLSFRRSLETLQSKAHKTVENQVKLGKLKAQLREMEDDLVKALAVKTRKEAKKMAIMDSISATKAKIEELKRIVEEHKARKDQCAAIISQQDIALATYEGKGDQVTGRREEIQEAIAWYNEVLGFQIEGGHGVKFIFTNINSKNPSEEYSFTIRHANDTYTLLDCSPHLNDIKELIHELNRTNGLFKFVRIMREKFQKAAEFGVLPQFTPLHQHSSTISISAPVSSVSTDNRDESPAEKNELQIKHERTNWHSEKAIHEGGRHAFLSPGSALSLRRSPRFQVRK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0885 318 Pfam Chromosome segregation protein Spc25 163 231 IPR013255 GO:0007059|GO:0031262
Vvi17g0885 318 Coils Coil 94 121 - -
Vvi17g0885 318 MobiDBLite consensus disorder prediction 256 276 - -
Vvi17g0885 318 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 7 286 IPR045143 GO:0007059|GO:0031262
Vvi17g0885 318 Coils Coil 59 79 - -
Vvi17g0885 318 FunFam Probable kinetochore protein spc25 138 235 - -
Vvi17g0885 318 Gene3D Chromosome segregation protein Spc25 140 236 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0885 K11550 - vvi:100267391 616.69