Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0881 ATGGATTTGATGAGAGATACAAAACTTAGGAATAAAACATGTTGTGTTCATCACACAACAGGACAAGCCCAATGTACACGAATACAAACCATTCTTCCACAAGAAACAACAACACCACAACATTCCTCAAACATGGCCTCTTCCTCTCCAATCATGTTCATATTTGTTGCTTTTCTTTTTGCCGCTTCTTCACTTAGCCCGGTCCTCTCACACCCCATTCCCTCAGATTCCGGCCACCACCGCCCAACGGCCAACCAGACTTTCCACCCAGGTCTACAGCTGCAGAAGCTGAAGAGAGTCAGAGCCTATCTCAGGAAGATCAACAAGCCTGCAGTCAAGACAATTCAGAGTCCTGATGGTGATGTGATAGATTGTGTTTTATCTCATCTCCAACCAGCTTTTGATCATCCTCAGCTAAGAGGAAAGAAACCATTGGATCCACCAGAAAGACCAAAAGGACATGACTCCATAAATGCTGTGGCAGAGACCTTTCAGATATGGATGAATTCTGGTGAATCATGCCCAGAAGGAACAATTCCGATTCGGCGAACCACAGAGAAAGATATTCTAAGAGCTAGTTCCATAAAAAGATTTGGAAGAAAATTAAGAAGAAATGTGAAGAGAGACTCAACAAGCAGTGATCATGAGCATGCAGTTGTTTTTGTCAATGGAGATCAGTATTATGGAGCCAAGGCCAGCATTAATGTGTGGGCGCCCCACGTGGCCGATCAATATGAATTCAGCTTGTCACAAATATGGATCATCTCTGGTTCATTTGGCAATGATCTTAATACCATAGAAGCTGGTTGGCAGGTCAGCCCAGAGTTGTACGGAGATAACTATCCAAGATTCTTCACATATTGGACAACCGATGCATACCAGGCCACTGGCTGCTACAACTTACTTTGCTCAGGTTTTGTCCAAACAAACAACAAGATCGCTATTGGGGCTGCAATCTCTCCAAGGTCGTCTTACAATGGCAAACAATTTGATATTGGATTAATGGTTTGGAAGGATCCAAAGCATGGACACTGGTGGCTTGAGTACGGGTCTGGACTATTGGTTGGGTACTGGCCATCGTTCTTGTTTAGCCACTTGGGGAATCATGCAAACATGATACAATTTGGTGGAGAGATTGTTAATACTAGATCAACTGGTTTTCACACATCAACACAGATGGGCAGTGGCCATTTTGCAGAAGAAGGATTTGGGAAAGCATCTTATTTCAGAAACTTACAAGTTGTGGACTGGGATAATAGCCTGCTTCCTCTACAAAACCTTCACCTACTGGCTGATCATTCAAATTGTTATGATATAAAACAAGGGAAAAATAATGTTTGGGGAACCTATTTTTACTATGGAGGTCCTGGAAGGAATGTTAAGTGTCCCTAA 1392 0.4289 MDLMRDTKLRNKTCCVHHTTGQAQCTRIQTILPQETTTPQHSSNMASSSPIMFIFVAFLFAASSLSPVLSHPIPSDSGHHRPTANQTFHPGLQLQKLKRVRAYLRKINKPAVKTIQSPDGDVIDCVLSHLQPAFDHPQLRGKKPLDPPERPKGHDSINAVAETFQIWMNSGESCPEGTIPIRRTTEKDILRASSIKRFGRKLRRNVKRDSTSSDHEHAVVFVNGDQYYGAKASINVWAPHVADQYEFSLSQIWIISGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNKIAIGAAISPRSSYNGKQFDIGLMVWKDPKHGHWWLEYGSGLLVGYWPSFLFSHLGNHANMIQFGGEIVNTRSTGFHTSTQMGSGHFAEEGFGKASYFRNLQVVDWDNSLLPLQNLHLLADHSNCYDIKQGKNNVWGTYFYYGGPGRNVKCP* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0881 463 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 100 459 - -
Vvi17g0881 463 MobiDBLite consensus disorder prediction 136 155 - -
Vvi17g0881 463 Pfam Neprosin activation peptide 114 220 IPR025521 -
Vvi17g0881 463 Pfam Neprosin 245 456 IPR004314 -
Vvi17g0881 463 FunFam Putative carboxyl-terminal proteinase 236 355 - -
Vvi17g0881 463 Gene3D - 238 351 - -
Vvi17g0881 463 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0881 Vvi-Chr17 10327303 10330366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0881 - - vvi:100246848 974.156