Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0879 ATGGCGATGCGTCTGAGTCATCCTCTTCGCCCTTCTTCCCTCCCAAAATTCCAATTCCGCCCTAAATCCCTCTCAACCTGCAAATTCTCAATTCAAAATCGCATTTCCAACTCCGATAATTCGCGTAAGCTAGTAATGGAAGTAAAGGAGAAGCTTGAAAAAGATCAGCATAGTCTCCCTGTTGGCAGAAATGGACGAGACGATGAAGACATGATTCTATGGTTTCTGAAGGATCGAAAGTTTTCGGTTGAAGATGCTGTCGCAAAATTGACTAAAGCCATTAAATGGCGTCAAGAATTTGGTGTGTCTGAATTGCATGAAGAGTCTGTCAGAATTGTAGCTGAAACCGGAAAAGCCTACGTGCATGACTTTCTTGATGTCAATGATAGACCAGTACTAATAGTGGTAGCATCAAAGCATTTTCCTGCTATGCAGGATCCTATTGAGGATGAGAAGTTGTGTGTGTTTCTGATTGAGAAGGTGTTGAGTAAACTCCCAGCTGGGAAAGAACAAATACTTGGGATAATTGATCTTCGGGGCTTTGGTACTGAGAATGCTGATCTTAAATTCTTAACTTTTTTGTTTGATGTATTCTACTATTACTATCCAAGGCGGGTGGGCCAGGTCCTTTTTGTGGAAGCTCCCTTTGTATTTAAACCAATTTGGCAGCTGGTGAAGCCCTTATTAAAATCATATGCTTCTCTGGTGAGATTTTGCTCCATGGAGACTGTGAGGAAGGAATATTTTACAGAAGAATCATTTCCAGCCAGCTTCAGAGACTGA 783 0.4163 MAMRLSHPLRPSSLPKFQFRPKSLSTCKFSIQNRISNSDNSRKLVMEVKEKLEKDQHSLPVGRNGRDDEDMILWFLKDRKFSVEDAVAKLTKAIKWRQEFGVSELHEESVRIVAETGKAYVHDFLDVNDRPVLIVVASKHFPAMQDPIEDEKLCVFLIEKVLSKLPAGKEQILGIIDLRGFGTENADLKFLTFLFDVFYYYYPRRVGQVLFVEAPFVFKPIWQLVKPLLKSYASLVRFCSMETVRKEYFTEESFPASFRD* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0879 260 SUPERFAMILY CRAL/TRIO N-terminal domain 38 108 IPR036273 -
Vvi17g0879 260 CDD SEC14 111 231 IPR001251 -
Vvi17g0879 260 Pfam CRAL/TRIO domain 115 257 IPR001251 -
Vvi17g0879 260 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 109 260 IPR001251 -
Vvi17g0879 260 SMART sec14_4 113 253 IPR001251 -
Vvi17g0879 260 Gene3D - 15 258 IPR036865 -
Vvi17g0879 260 SUPERFAMILY CRAL/TRIO domain 108 248 IPR036865 -
Vvi17g0879 260 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 260 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0879 - - vvi:100263783 515.768