Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0877 ATGTGGGACAAAAGCCCAAACCCATGGTTCATAGTCCCATGCGCTAGTCAACTTCTGCATCAGAGAAAGATGGAGAAGCCATGGCTGTCGTTGATGTTGATCAGCATCCTCTGTTGTCTTGCTCTCTGTAAAGGAATTGAATCGCCTGAATTTGCAGTGATTCATGCAGAATCAGATTTCGAGGTCAGGCTCTACCCGGAATCGACTTGGATGACGGCTTCTGTTCGGGACATATCCTTTGAGAAATCAACCTGGAATGGCTTTCACAGGCTGTTTCAGTACATCCAAGGCGCCAATTTGAACTTTTCTCGGATCGCAATGACCGCACCTGTCCTAACAAGCATTGTTCCTGGTGCCGGCCCTCTTCACTCATCGGCTTATTTTGTCCGGTTCTACTTGCCTGTGAAGTTCCAGGCCACCCCTCCACTTCCTCTCCCTGAACTACACCTGAAACCAGATAAATGGGCAATTCACTGTATTGCAGTCAGGAAGTTCTCAGGATATGCCAGGGATGATAACATTGTTAAAGAAGCAGAGAAACTTGCCATCAGCCTGAGTAGGTCCCCATGGGCAAACTTCACTACTTCTGAAAGTAATTATGCTTACTCAATCGCACAATACAGTTCTCCATTTCAGATCTTTGGGCGCGTAAATGAAATCTGGGTGGATGTCAAAAATTCTGGGTTGGAAGGCTGTGAGTCCAGCAGCGTGTCTACATACTGA 723 0.4689 MWDKSPNPWFIVPCASQLLHQRKMEKPWLSLMLISILCCLALCKGIESPEFAVIHAESDFEVRLYPESTWMTASVRDISFEKSTWNGFHRLFQYIQGANLNFSRIAMTAPVLTSIVPGAGPLHSSAYFVRFYLPVKFQATPPLPLPELHLKPDKWAIHCIAVRKFSGYARDDNIVKEAEKLAISLSRSPWANFTTSESNYAYSIAQYSSPFQIFGRVNEIWVDVKNSGLEGCESSSVSTY* 241
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0877 240 Pfam SOUL heme-binding protein 46 222 IPR006917 -
Vvi17g0877 240 Gene3D Regulatory factor, effector binding domain 45 231 IPR011256 -
Vvi17g0877 240 PANTHER HEME-BINDING PROTEIN-RELATED 41 232 IPR006917 -
Vvi17g0877 240 FunFam Heme-binding protein 2 46 230 - -
Vvi17g0877 240 SUPERFAMILY Probable bacterial effector-binding domain 36 224 IPR011256 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g0877 Vvi-Chr17 10241880 10248823 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0877 - - vvi:100248414 482.256