Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0867 ATGTGCCATGAAGCACTTAAGTATCTGAAGAAAGGGGGACCAGGGAAGAGCCCATCTACTGGCGGAATAATCATAAACATCAGTGCAACCCTGCATTACACAGCAACTTGGTATCAAATCCATGTTTCTGCAACCAAGGCAGTTGTTGATAGCATAACTAGGAGCTTGGCATTGGAGTGGGGAACAGATTATGATATAAGAGTGAATGGGATTGCACCCGGACCCATTGATGACACTGCTGGTCTAAGTAAACTTGCACCTGAGGACGTAGTGAGAAAGGCAAAAGAGCATGAGCCTCTATTTAAACTGAGGGAGAAATGGGATATTGTTATGGCTGCCGTGTACCTTGCATCTAAATCCTTGTCCATGTGA 372 0.4489 MCHEALKYLKKGGPGKSPSTGGIIINISATLHYTATWYQIHVSATKAVVDSITRSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLREKWDIVMAAVYLASKSLSM* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0867 123 PRINTS Glucose/ribitol dehydrogenase family signature 64 81 IPR002347 -
Vvi17g0867 123 PRINTS Glucose/ribitol dehydrogenase family signature 42 61 IPR002347 -
Vvi17g0867 123 PRINTS Glucose/ribitol dehydrogenase family signature 16 32 IPR002347 -
Vvi17g0867 123 PRINTS Glucose/ribitol dehydrogenase family signature 99 119 IPR002347 -
Vvi17g0867 123 Pfam Enoyl-(Acyl carrier protein) reductase 3 122 - -
Vvi17g0867 123 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 120 IPR036291 -
Vvi17g0867 123 Gene3D - 1 123 - -
Vvi17g0867 123 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 1 119 IPR045017 GO:0008670|GO:0009062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0867 Vvi-Chr17 10087930 10088383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0867 1 120 Acyl Lipid Metabolism Gene Families AT3G12800 67.769 1.33e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0867 K13237 - vvi:100248476 231.106