Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0860 ATGGGTTTGAGCAGGTATTCATGGGTGGTTTTGCTTTGTTGGGTATTTTTACTTTTATGTTTAAGAAGTGGATGTGATGGTTCAGAGGTGTCTGTGAACTTCTTGACGGCTCCTCTTGCATTCTCACGGCTGAACTCAGCCACATTTGTGTTTGAAGTTTTGGTGGGTGGGAATAATGATCCCTGCAATGACTGCATATTCAATTGCAAGTTGGATAATGGTACTCCTTCGGATTGTCAAGCAAAGAAAGTTTCTTACACAGGCTTACTGGATGGGAATCATACATTTGAGGTCTGCACCAATGGATCTCAAGGAGTTGGCTGTGCTAGCTATGGCTGGACTGTTGACACAGTCCCTCCTACAGCATATGTTACAGCATCGACATCATTTACAAATGCTCTAAACTTTTCTGTAAATATTTCTTTTAGTGAACCCTGTACAGTTGGAGGCAGTTTTGGATGTTCCTCTGTGAATGCCTGCAACCTTCTTGTATATGGTGCTGGCCAAGTTATACCATCCACATTCAACGTTCTTCAGCCAAACCTCAAGTTTTCTGTTCTTGTGGGTTTATCTTATAGTGTTCCGTATGGACGGGTGATACTGGTAATGGACAAGAGTTTCTGTGCTGACAGTGCCAGAAACAAATTTATGAGAACAGAAAATTCAAGCTTACTCGTGCATTTTGACATAAGAAGTGTGTTTGTCAACCTGAGGACTCATGTTCCCGAAAAGCTACTTGAACTTAACAGTGAAACTAGAACAGTGCAAGCAACTAATAATTATAAGAATTTAAAGGTGTATTTATATTTCTCAGAACCTGTTCTCAACTCATCAACAGAAGTTTTGAGTTCTCTCAATACAAGCCAGGGTGTGCTTCTTCCTAATGGTGGAAGGAGCCTTGGAAATCGCAGATTTGGCTTTCTGGTTGAGAATGTATCAAGTGTTGCTATAGTCACAATAAGCTTTGATTCCTCTGCTATCATAAGCAGACAAGGGACCCCAGTTTCTCCAATTGCTCCAGTTACTTTTCTTTATGATTCTCAGAGACCTATTGTGAGGTTGAGTACAACATCCAATATGCGAACAAGAGAACATACTATCCCGATATTGATAAAGTTCTTGAAGCCTGTTTTTGGTTTCAACTCTTCTCATATATCAATCTCAGGAGGACAATTGCAGAGGCAAGTGATTAGTTGTTCCCAAACTCAAGCATACATCTTTAATGCAATAAGTAGAAGCATATATACTGCAGAGATAAAAGCAGATCATGATGTTGTATCCGTCAATGTACCGGAAAACATAACAGGGGATGTTGCTGGAAACCAAAATCTAGCATCAAATATCCTACAAGTGAGGCACTATTCTGTGCCAATAACGTCTTGTGTAATTTCCACCTTTACAACTGCTTCTTTTGTGGCAACATCCTTGGCTGCGGGGTGGCTCACTGTTTCAACTGCAAGCCTTCAATCTGTTGGGGCATTTTTGAGACCACGTTCTTATTTGGTGTCTGATCCTGCAAGGAATCTTTTTAGAATTGCATCCCACATTCAGGTTTTTGCACTGTCTAGATGGTTGCCAGTTACCCTGCCAGTCGAGTACTACGAGTTTGCCAGGGGAATACAGTGGAGTATCCCCTACTTCAGTCTCCCATGGGAAACCGGGCACATTCATCCCATTATGGTGGGGTCAAGCTCCCCCACTCTCTCACATTTATATGCTTCTAGAATTCATGATTCAGGATTTTTTGAGACTGTGCAACCAGAAGAAGATAATTTGGATAGGGCTGCTTCTGTATATGGGCTCCCACTGACTCCAATGGAATACAGAACATTTTTTGAGAACCATAACTTTAAACCAGAAGCTGAGTATATTTCGGATCCACAAAATTCAAATGGGCGGAGGGATTTCAATAGAAGCATGTTCTGGTTAGCTGTAATTGGTGGCAGCTTGATACTATTGCATGCTTTACTCGTCCTTGTTTTGAAAATCAGGAAGAAAAGCTCAGAAAAACAGGGGAGTTATGGAGCACTCGTATTCCCAAGATTTGAAATATTTCTGATAATTCTCGTGTTACCTTGTATCTGTGAAGCATCAGCCTCTCTAGTTAAAGGAGGAACAACTTCAGCAGTTGTAGTTGGCATTCTGCTGTTTGGTGTTGTAGCTTTTGTACTGCTAGCCTTATTCTTGTTCCTTTCGGTTGGAATATCATTTGGGAAGCTGCTTCTGTACAAGGAAGTCCATCGAGAAGGTCAGCAATTTCACTGGTATCAAGATATTGTTCGAGTGACTCTGGGCCCTGGTAAAAGAGGTCAGTGGACATGGAAGAACCAGTCAAATTCTGTTTATTTAACCATGTTTGGCCCTCTGTTTGAAGATCTAAGAGGTCCTCCAAAATACATGCTCTCACAAATAGCTGGTGGCAATTCACGTAAGCCCAGTGATCATATCATTGCCTCGGATGATGAGACAGAAGATGCAGAAGCACCTTTTATTCAGAGGGTTTTTGGAATTCTCAGAATATATTATACACTGCTTGAATCCATGAAACGAGTTACTCTTGGGATTGTGGCTGGTGCCTATTCAGAGCAGTGGTATTCAAAAGCTCCAATAATTTTCTTACTTTGCATCACTTCTTTCCAGCTTTTCTTCCTCGTTCTTAAGAAGCCTTTCATCAAGAAAAAGGTTCAACTAGTTGAGATCATCTCAGTTTCCACTGAAGTGGCTATTTTTGCTTCTTGTTTGGTTCTATTAGAGATGGAATTTCCAGCAGGGGCCGAGAAAAAAATTGCAATATTCATGCTTTTACTGTTCTTGGTAGGATATGTGGCACAGATGATCAATGAGTGGTATGCCTTGTATCGACAGGCAAAGCGACTGGACCCTGCAGAAAGCTCATTCCTATCGGGTTTGAAAACAGCTTTGATCGGATTTCTCCTGTTTTTCATTCCATTGAAAATCATTGAGAAACTAGGCTGGTTCCCAGTAAATCAACCTGGTGATGGAGAGACTGGGGATGCTACTTCTTCAGCTGACAGGTCCAAGAGCTCTGGAAGTGGGACCGTGCGTACATCAGATAGGCCATGGTTGAAACAACTAAGAGAACTGGCAAAAGCTAGCTTTAGTAAAGAAGGAAGTGGGGTTCCAACTGATCCTTCAACCAGTCAATCCAGATGGAGTATCCTGCTATTCATTCTTTTCTGTTTGCAAGTGTAA 3213 0.4149 MGLSRYSWVVLLCWVFLLLCLRSGCDGSEVSVNFLTAPLAFSRLNSATFVFEVLVGGNNDPCNDCIFNCKLDNGTPSDCQAKKVSYTGLLDGNHTFEVCTNGSQGVGCASYGWTVDTVPPTAYVTASTSFTNALNFSVNISFSEPCTVGGSFGCSSVNACNLLVYGAGQVIPSTFNVLQPNLKFSVLVGLSYSVPYGRVILVMDKSFCADSARNKFMRTENSSLLVHFDIRSVFVNLRTHVPEKLLELNSETRTVQATNNYKNLKVYLYFSEPVLNSSTEVLSSLNTSQGVLLPNGGRSLGNRRFGFLVENVSSVAIVTISFDSSAIISRQGTPVSPIAPVTFLYDSQRPIVRLSTTSNMRTREHTIPILIKFLKPVFGFNSSHISISGGQLQRQVISCSQTQAYIFNAISRSIYTAEIKADHDVVSVNVPENITGDVAGNQNLASNILQVRHYSVPITSCVISTFTTASFVATSLAAGWLTVSTASLQSVGAFLRPRSYLVSDPARNLFRIASHIQVFALSRWLPVTLPVEYYEFARGIQWSIPYFSLPWETGHIHPIMVGSSSPTLSHLYASRIHDSGFFETVQPEEDNLDRAASVYGLPLTPMEYRTFFENHNFKPEAEYISDPQNSNGRRDFNRSMFWLAVIGGSLILLHALLVLVLKIRKKSSEKQGSYGALVFPRFEIFLIILVLPCICEASASLVKGGTTSAVVVGILLFGVVAFVLLALFLFLSVGISFGKLLLYKEVHREGQQFHWYQDIVRVTLGPGKRGQWTWKNQSNSVYLTMFGPLFEDLRGPPKYMLSQIAGGNSRKPSDHIIASDDETEDAEAPFIQRVFGILRIYYTLLESMKRVTLGIVAGAYSEQWYSKAPIIFLLCITSFQLFFLVLKKPFIKKKVQLVEIISVSTEVAIFASCLVLLEMEFPAGAEKKIAIFMLLLFLVGYVAQMINEWYALYRQAKRLDPAESSFLSGLKTALIGFLLFFIPLKIIEKLGWFPVNQPGDGETGDATSSADRSKSSGSGTVRTSDRPWLKQLRELAKASFSKEGSGVPTDPSTSQSRWSILLFILFCLQV* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0860 1070 PANTHER - 5 1058 - -
Vvi17g0860 1070 MobiDBLite consensus disorder prediction 1001 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0860 Vvi-Chr17 9949638 9958882 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0860 - - vvi:100257111 2005.33