Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0858 ATGATGGCTTCGCTTAGTCACCATCCCGTATATCTTCTCTCTTCATTTACTGGCCGATATCCCCAAAAGTGCCTTTTTGGGAACCCATATGTTCGGTTTGAGCAAAGATGCGTTACCAAGACTCTCGTGGCTTCTCGGCCCATTTCAGCCCCACCCACCTCCTTCAATAAGTTGATTGAATCGTTGATTAGCCGCGTGGATTTGACAGAGTCGGAGGCGGAAGCGTCTCTTGATTTTCTGTTGAGTGAAGCCAATGAAGCGCTCATTAGTGCTTTCCTTGTTCTCTTGAGAGCCAAAGGCGAGACGTATGAGGAAGTTGTGGGCTTAGCGAGGGCGATGATCAAGTGTTCTAGGAAGGTGGAGGGGTTGAAAGACGCAGTGGACATAGTGGGTACAGGTGGAGATGGGGCGAACACGGTGAACATTTCTACGGGCGCATCAATACTTGCGGCGGCTTGTGGAGCCAATGTTGCAAAGCAAGGAAACAGGTCGAGCTCTTCTGCGTGTGGCAGTGCTGATGTGTTGGAAGCACTGGGGATTGCCATTGAATTAGACCCGCAGGGGGTAACAAGGTGTGTGAATGAAGCAGGAATTGGGTTTATGATGGCTCCAATCTACCATCCAGCAATGAAGATTGTCGGTCCTGTGAGGAAAAAGCTGAAAGTGAAAACTGTTTTCAATATACTAGGCCCTATGTTGAATCCAGCCAGAGTTCCTTTTGCTGTTGTTGGGGTATTCACAGAAGACCTAGTTTTGAAAATGGCTAAAGCACTTCAACGTTTTGGAATGAAAAGAGCATTGGTGGTTCACTCAGAGGGCTTGGATGAAATGAGCCCCCTTGGACCTGGACTTGTCCTTGACGTTACTCCAGAAAAGATTGAGAAGTTTTCATTTGACCCATTGGAGTTTGGTATTCCTCGCTGTACTCTGGATGACTTGCGAGGTGGAGGGCCAGACTATAATGCTGAGGTACTAAAGCGTGTACTATCAGGAGAGAAAGGGTCGATTGCAGATGCATTTGTCCTAAATGCAGCAGCAGCACTCTTAGTCAGCGGCCGTGTGAACACCTTGGCTGATGGAGTATCCCTGGCTCGTGAAACACAGGAATCTGGCAAAGCCATCAAAACACTTGATTTGTGGATAGAGATCTCCAATAAGGCGAAAGCAGCACCATCCAGCCCTTAA 1185 0.481 MMASLSHHPVYLLSSFTGRYPQKCLFGNPYVRFEQRCVTKTLVASRPISAPPTSFNKLIESLISRVDLTESEAEASLDFLLSEANEALISAFLVLLRAKGETYEEVVGLARAMIKCSRKVEGLKDAVDIVGTGGDGANTVNISTGASILAAACGANVAKQGNRSSSSACGSADVLEALGIAIELDPQGVTRCVNEAGIGFMMAPIYHPAMKIVGPVRKKLKVKTVFNILGPMLNPARVPFAVVGVFTEDLVLKMAKALQRFGMKRALVVHSEGLDEMSPLGPGLVLDVTPEKIEKFSFDPLEFGIPRCTLDDLRGGGPDYNAEVLKRVLSGEKGSIADAFVLNAAAALLVSGRVNTLADGVSLARETQESGKAIKTLDLWIEISNKAKAAPSSP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0858 394 FunFam Anthranilate phosphoribosyltransferase 121 386 - -
Vvi17g0858 394 FunFam Anthranilate phosphoribosyltransferase, chloroplastic 41 121 - -
Vvi17g0858 394 NCBIfam anthranilate phosphoribosyltransferase 59 382 IPR005940 GO:0000162|GO:0004048
Vvi17g0858 394 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 124 386 IPR035902 -
Vvi17g0858 394 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 48 120 - -
Vvi17g0858 394 Pfam Glycosyl transferase family, helical bundle domain 57 115 IPR017459 -
Vvi17g0858 394 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 121 391 IPR035902 -
Vvi17g0858 394 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 53 386 IPR005940 GO:0000162|GO:0004048
Vvi17g0858 394 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 55 120 IPR036320 -
Vvi17g0858 394 Pfam Glycosyl transferase family, a/b domain 124 373 IPR000312 GO:0016757
Vvi17g0858 394 Hamap Anthranilate phosphoribosyltransferase [trpD]. 57 383 IPR005940 GO:0000162|GO:0004048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0858 Vvi-Chr17 9936847 9941154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0858 K00766 - vvi:100255305 759.214