Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0857 ATGACTACACTACTACTAGTATTCTTTACAACCACCCAGCTGTTTGCTCTCACCTCACTCGCATTACTGGTCTCCGGCCGTGCCGTCCATGTCAACACATGCCGATCCTACTGCGGCAACATCACCATTGACTACCCCTTTGCGCTCCGATCAGGCTGCGGCCACCCGGGTTTCCGCGACCTGCTGTTTTGCATGAATGATGTGCTCATGTTTCACATAACCTCAGGATCATACAGGGTCCTGGATATCGACTACGCTTACCAGGCCCTTACGCTTGACGACCCCCACATGTCCACTTGTGAGTCGATTGTGCTGGGAGGCAAGGGGAATGGGTTCGCGATCGAGCACTGGCGGGCGCCGTACCTGAACCCGGCTGCAGACAATGTGTTCATGTTATTAGGCTGCTCGGCACAATCCCCACTCTTCCAGGGGTTCCCAAGCAAGCATCTTCCGTGTAGAAATGTTTCAGGGATGGGGTGTGAGGAGTACTATTGGTGTTCAGCTTGGGGAGTGTTTGGGCCAAAGAAGTTGGGGTCTGGGACAGGGCCGCCGGAGTGTTGTGCGGTGCCGTTTGAGGCGATCAAGGCTATAAACCTCACGAGGCTGGAGTGTGAGGGGTATAGTAGTGCCTACAGTTTAGCGCCATTGCGAGAGATTGGACCTGGGGGGTGGTCGTATGGCATAAGGGTGAGGTACTCGGTGCAGGGGAATGAGTTCTGTCGAGCCTGTGAGGCCACCGGCGGCGCCTGTGGGTACGGGAGCGATGGCGTTCGGGAGCTGTGCCTGTGTGGGAGCTCCAATTCCACGTCCAATTGTGATTCAGTGAAGTCATCTTCAAGCAAAGTAGGAAGGTCATTGGCCAACACTTTAGCAGGAATTTTGGGTTGTATAGTAACATGGAGGAAAATGCACCAGACTTGA 921 0.544 MTTLLLVFFTTTQLFALTSLALLVSGRAVHVNTCRSYCGNITIDYPFALRSGCGHPGFRDLLFCMNDVLMFHITSGSYRVLDIDYAYQALTLDDPHMSTCESIVLGGKGNGFAIEHWRAPYLNPAADNVFMLLGCSAQSPLFQGFPSKHLPCRNVSGMGCEEYYWCSAWGVFGPKKLGSGTGPPECCAVPFEAIKAINLTRLECEGYSSAYSLAPLREIGPGGWSYGIRVRYSVQGNEFCRACEATGGACGYGSDGVRELCLCGSSNSTSNCDSVKSSSSKVGRSLANTLAGILGCIVTWRKMHQT* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0857 306 Pfam Wall-associated receptor kinase galacturonan-binding 34 93 IPR025287 GO:0030247
Vvi17g0857 306 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 5 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0857 Vvi-Chr17 9922843 9924689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0857 7 141 Receptor kinase-like Gene Family AT1G21240 28.986 8.16e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0857 - - vvi:100250137 599.742