Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0855 ATGGACACCGTGCACCGCCTCAAGTCGACGGAGCCGCCGCTATGGCTCTCACCGAGTTCCGAACTCTCGCAAACGGCTCGTGCAGCTTCACAGCACCTTTTCGCTTCTCTAAAACCATTTGCTCCCAAATCGCCCTTTGATCGCCTCCTCGTCGACGGATTCGACGCCGAGCAAATTTGGCAGCAGATTGACATCCAATCTCAGCCTATTATCTCCAGCCTCCGCCGCCAGATCAATCGGTTTGAGAAGAATCCGGAGGAAATTTCGAAGATTTTTGGTCGGAAGAAGGTTCGAAGAGTTGAAGAGAAGGTTCGAGAGGTTGAGCAGAAGGTTCCAGAAGAGGAGATTGGGGGTTTTTCTGAAGAGGAAGATGAGGATTTGGAGGAGTTTGACGAAGATAGCGAAGAGGGAGAGGACGAGGAGAGAGAAAGCGAAGAGGATGAGGCGGAGGACAACGAAGACGGCGGAGGTGGTGGAATCGAGGATAGGTTTTTGAAAATTAAGGGTCTGGAGGAGTATTTGGAGGCAGAGGAGGACAGAGAGTACGGATTGAAAAATAAAAAAGGTGGTAGCGATGCTTTGAAAGATGGTGAGGACGAGAATGAGGATGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGATGACGAGCTTGGAGCTTTTGACCTTGATGATGGGGAAAACGAAGGCATGGATGAATTGGATGATATTAAATATGAAGATTTCTTTGGTCCTAAAAGGAAAGTTTCAAAAAAATCCAAATTGACTGATGGGTTGGAAGACTCCGACAGAAGTGATGAACAAGAAGATGATCAGGCAACTGATAATAAGAACAAAGTTCTTTCTACCCATGAGAAAGAGCGTGAGAATGTTCGAGCAAAGATAGAGGAGATGGAGAGAGCAAATTTGGAGTCAAAAACTTGGACCATGCAGGGAGAGGTAACTGCTGCTAAAAGGCCAAAGAATAGTGCTTTAGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCTCCTCCTGTAATCACAGAGGAGGTTACAGCATCCCTTGAAGATTTGATCCAAAAAAGAATCCTTGAGGGTCGTTTTGATGATGTTCAAAAGGCTCCACGTCTACCGTCTAAGGCACCGAAAGAAGTTAAAGAGATGGATGAAAATAAGAGCAAGAAGGGTCTTGCTGAGATTTATGAGGAAGAATTTGTTCAGAAGACGAATTTGGATTCTGCCCCATTGTCCTTCTCAGATGAACAAAGGAAAGAGGCAAGCATGCTGTTCAAGAAACTTTGCTTGAAGTTGGATGCTCTCTCGCATTTCCACTTCACTCCAAAACCTGTTATAGATGACATGTCTATACAAACAAATGTACCTGCTCTTGCAATGGAAGAGATTGCACCTTTGGCAGTTTCAGATGCAGCTATGCTGGCTCCTGAAGAAGTCTTTGAAGGCAAAGGAGACATTAAGGAAGAAGCAGAGTTAACACAGGCAGAGAGGAAGAGGAGGAGAGCAAACAAGAAGAGGAAATTTAAAGCCAACACAACAAAAAGAGCTGCAAAGAAGGCACAGGACGGCACATTGCAAAACAATAAAGAGGGCAAAGAAGAAGCATGA 1602 0.4532 MDTVHRLKSTEPPLWLSPSSELSQTARAASQHLFASLKPFAPKSPFDRLLVDGFDAEQIWQQIDIQSQPIISSLRRQINRFEKNPEEISKIFGRKKVRRVEEKVREVEQKVPEEEIGGFSEEEDEDLEEFDEDSEEGEDEERESEEDEAEDNEDGGGGGIEDRFLKIKGLEEYLEAEEDREYGLKNKKGGSDALKDGEDENEDEEEEEEEEEEDDELGAFDLDDGENEGMDELDDIKYEDFFGPKRKVSKKSKLTDGLEDSDRSDEQEDDQATDNKNKVLSTHEKERENVRAKIEEMERANLESKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTASLEDLIQKRILEGRFDDVQKAPRLPSKAPKEVKEMDENKSKKGLAEIYEEEFVQKTNLDSAPLSFSDEQRKEASMLFKKLCLKLDALSHFHFTPKPVIDDMSIQTNVPALAMEEIAPLAVSDAAMLAPEEVFEGKGDIKEEAELTQAERKRRRANKKRKFKANTTKRAAKKAQDGTLQNNKEGKEEA* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0855 533 MobiDBLite consensus disorder prediction 117 155 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 269 292 - -
Vvi17g0855 533 PIRSF snoRNP_Mpp10 6 533 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vvi17g0855 533 Coils Coil 120 147 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 366 386 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 178 195 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 103 164 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 497 512 - -
Vvi17g0855 533 Pfam Mpp10 protein 16 513 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vvi17g0855 533 Coils Coil 280 305 - -
Vvi17g0855 533 Coils Coil 194 215 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 236 260 - -
Vvi17g0855 533 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 4 531 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Vvi17g0855 533 MobiDBLite consensus disorder prediction 488 533 - -
Vvi17g0855 533 Coils Coil 483 510 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 178 292 - -
Vvi17g0855 533 MobiDBLite consensus disorder prediction 196 235 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0855 K14559 - vvi:100241507 825.469