Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0853 ATGGATAGAATTGTTCAGTGGAAAAATCAACTGCTACAATATGTAAATCAAGCACAACAATGGCTTCAACGGATGTCATCAACTCCACTTTACACTACTATTGGCGTTGTATCCCTATCAACCATCGTCATTTTTTCAATTCGTTGGTTGAAGCCAAGAAAATCCAATACTATTATTCTTGCTGGACTAAGTGGTAGTGGGAAAACCGTACTTTTCTATCAGCTTCGAGATGGTTCTTCACATCAAGGAACTGTTACTTCGACGGATACAAATGAAGCCACTTTTGTGCTGCAAACTGATCCCTTTTGGAAGGGAAAGCGAAGGCTCATTCACTTGGTTGATGTTCCTGGGCAATCCCATCTTCGATCTAAACTTGATAAATACTTGCCCCAAGCAGCTGGCCTTATTTTTTTGGTGGATGGTTTAGAGTTTTTACGACATTGCCCTGCAATTGCTGAGTACTTGTTGGACATCCTGACCAATACTACCGTTGTGAAGAGAAAAATCCCTGTGCTCATCGTCTGCAACAAAACTGATAAAGTAACTGCACATACCAAGGAATTCATTCAAAAACTACTGGAAAGGGAAATTCAAAAGCTGAGGGCATCAGGAACTGCCATTTCAGAAGCTGATATTGCTAATGAGTACACACTTGGTGTAACTGGAGAAGCCTTTACCTTCTCCCAGTGCTGCAATATGGTTACTGTTGAAGAAGCTTCCGGACTGGTGGGCGAGATATCTCAGGTTGAGCAGTTCATCACAAAGCACCTAAAGCCTTAG 780 0.4179 MDRIVQWKNQLLQYVNQAQQWLQRMSSTPLYTTIGVVSLSTIVIFSIRWLKPRKSNTIILAGLSGSGKTVLFYQLRDGSSHQGTVTSTDTNEATFVLQTDPFWKGKRRLIHLVDVPGQSHLRSKLDKYLPQAAGLIFLVDGLEFLRHCPAIAEYLLDILTNTTVVKRKIPVLIVCNKTDKVTAHTKEFIQKLLEREIQKLRASGTAISEADIANEYTLGVTGEAFTFSQCCNMVTVEEASGLVGEISQVEQFITKHLKP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0853 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Vvi17g0853 259 PANTHER TRANSFERRIN 28 255 - -
Vvi17g0853 259 Pfam Signal recognition particle receptor beta subunit 54 230 IPR019009 -
Vvi17g0853 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 194 IPR027417 -
Vvi17g0853 259 Gene3D - 51 257 IPR027417 -
Vvi17g0853 259 CDD SR_beta 56 255 IPR019009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0853 Vvi-Chr17 9893457 9897670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0853 1 259 Miscellaneous Gene Families AT5G05670 58.077 4.18e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0853 K12272 - vvi:100853033 513.842