Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0851 ATGCATGCATTGAGTTTCAAAGGGTTTCCCGATTTGAACGTTGGCAGGGAGCGCTCTTGGCCTGGCCGACTGTACCATTGTACAGGGACGAGAAAGGATGGTTGGAATTGTAGGGATTTTAGGAGAAATTGCAGGATTTTTGCTTGTTCTTCGGGGGCAAATGGGGAGAATCAGAGCCCGAGTTCGTTTCTTTCTCGCAGTCAAACTTACGCTCTTCTGAAGCAGCAACTGCAGGTTGCTGCAAAATCTGAGGATTACAAAGAAGCTGCTAGACTACGCGATTCATTGAGATTATTTGAGGAAGAGGAGCCGGTTTTGCGTCTTCGCAGATTGATTAAAGAGGCAGTCGCCGATGAGAGGTTTGAGGATGCAGCTAGATACCGTGATGAGCTTAAGGAAATTGCACCGCATTCTCTCTTAAAATGTTCAAGTGACGCAACAACCGTGGGGATCAGGGTTCAAGTTAGAAGTGTGTACATTGAAGGTCGAAGTCAGCCTTCAAAAGGGCAGTTCTTTTTTGCGTATAGAATAAGAATTACCAATAACTCAGACCGCCCTGTTCAACTTCTCAGAAGGCATTGGATTATAACAGATGCAAATGGAAAAATTGAGCATGTCTGGGGGATTGGTGTCATAGGTGAACAGCCAGTTATACTTCCTAGAACCGGTTTTGAGTACTCATCTGCATGCCCATTAAGCACTCCAAATGGAAGAATGGAGGGTGACTTTGAAATGAAACATATTGACAAAGTGGGTTCTCAGACTTTCAATGTGGCAATTGCCCCATTTTCTCTCTCCACACTCGGAGATGAGTCTGATACATTTGAGATGTGA 834 0.4472 MHALSFKGFPDLNVGRERSWPGRLYHCTGTRKDGWNCRDFRRNCRIFACSSGANGENQSPSSFLSRSQTYALLKQQLQVAAKSEDYKEAARLRDSLRLFEEEEPVLRLRRLIKEAVADERFEDAARYRDELKEIAPHSLLKCSSDATTVGIRVQVRSVYIEGRSQPSKGQFFFAYRIRITNNSDRPVQLLRRHWIITDANGKIEHVWGIGVIGEQPVILPRTGFEYSSACPLSTPNGRMEGDFEMKHIDKVGSQTFNVAIAPFSLSTLGDESDTFEM* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0851 277 SUPERFAMILY ApaG-like 147 266 IPR036767 -
Vvi17g0851 277 Pfam UvrB/uvrC motif 107 134 IPR001943 GO:0005515
Vvi17g0851 277 Gene3D ApaG domain 141 272 IPR036767 -
Vvi17g0851 277 ProSiteProfiles UVR domain profile. 102 137 IPR001943 GO:0005515
Vvi17g0851 277 ProSiteProfiles ApaG domain profile. 145 272 IPR007474 -
Vvi17g0851 277 ProSiteProfiles UVR domain profile. 67 102 IPR001943 GO:0005515
Vvi17g0851 277 PANTHER OS05G0170800 PROTEIN 1 274 - -
Vvi17g0851 277 Pfam ApaG domain 163 246 IPR007474 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0851 - - vvi:100267315 559.681