Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0847 ATGAGGCCTCAAATCGTGTTATTTGGGGATTCGATCACAGAGCAATCATTCAGATCAGGTGGATGGGGTGCGGCTCTCGCCGACACCTACTCTCGCAAGGCTGATATAGTGTTGCGTGGATATGGTGGATACACCAGTAGACTGGCATTGTTCTTGTTACAATACCTTTTTCCTCTGGGCTCTACAAAACCTCCTGTTGCAACAACAGTTTTCTTTGGGGCAAATGATGCAGCTCTTGCAGGGAGGACCAGTGAACGGCAGCATGTTCCTGTTGAAGAGTACAAGGAAAATCTCAGGAGAATAGTCCATCATTTGAAGGAGTGCTCTTCCACCATGCTAGTAGTGCTTGTAACTCCACCACCTGTTGATGAAGAAGGGCGTATGCAATATGCAAAATCTTTGTATGGTGAGAAAGCAATGGAGCTGCCTGAAAGAACAAATGAAATGGCTGGAGTTTATGCAAGGCAGTGTGTCGAGTTAGCTAGGGAACTGGGTCTTCCTTCCATCAACCTATGGTCCAAGATGCAGGAAACAGAGGGTTGGCAGAAAAAATTCCTCAGCGATGGGCTGCATCTGACAGCAGAAGGCAATGCAGTGGTCTACCAAGAAGTTGAAAGAGTGTTGAGGGAAGCATGGCTTCCGGCTTCAGAAATGCCGAATGATTTTCCTCACCATTCACTAATAGATTGGAAGCACCCTGAGAAGACTTTCCAGCAACAATGCATCTGA 729 0.4678 MRPQIVLFGDSITEQSFRSGGWGAALADTYSRKADIVLRGYGGYTSRLALFLLQYLFPLGSTKPPVATTVFFGANDAALAGRTSERQHVPVEEYKENLRRIVHHLKECSSTMLVVLVTPPPVDEEGRMQYAKSLYGEKAMELPERTNEMAGVYARQCVELARELGLPSINLWSKMQETEGWQKKFLSDGLHLTAEGNAVVYQEVERVLREAWLPASEMPNDFPHHSLIDWKHPEKTFQQQCI* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0847 242 Gene3D SGNH hydrolase 2 236 IPR036514 -
Vvi17g0847 242 Pfam GDSL-like Lipase/Acylhydrolase family 7 198 IPR013830 -
Vvi17g0847 242 FunFam isoamyl acetate-hydrolyzing esterase 1 homolog 2 235 - -
Vvi17g0847 242 SUPERFAMILY SGNH hydrolase 3 211 - -
Vvi17g0847 242 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 2 234 IPR045136 -
Vvi17g0847 242 CDD Isoamyl_acetate_hydrolase_like 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0847 Vvi-Chr17 9828443 9839860 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0847 K23978 - vvi:100257038 480.715