Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0844 ATGGGAGAAAAACCAAATGCCCCAAAAACCCTAGCTGAGGACCCAGGTGCAAAAGCCCTAGAAGAAGCTTCTGGGTCATTTGGTTTCAGTGAGAGTCCAACTGGTTCAGTGTCAGTTTTGGTGGAAAAGAATGGTGGAAGTGCTGATGTTGATGATAAGGACAATGGGGTCAGCAATGTAGTAGTTGCCACTCTTGCTGGTACTGAAAAGTGTTTGGGTGTTGGTCAGACCGAGAAGTGTTGTTTATTGAACGAAGGGGTGGTGGTGGAAACTAAGGTGCATGGGGCTTCAGATTCTGTGGAATCCCAAATAGTTTTGCCTCAAAACAATGAAGTTAGTGTAGAGGGAGATACGTCTTTGTCTGAAGTGGGGAGGATTGGCAATGGGGATGAGAAAAGTGGGATTGAGAAAATGGTGATGGACGAAGAAATGAAAGATTGCCCCATGTCACCATTGGATGGGGTTGAGTCGCCGAAGAAGATAGAAGTTTCTGGAGATGGCATTTCGCTTGTTGTGGAAGTTTCTGGTCCACCAAGTGGAGTTATAGGGGATAATCTAGATGAAGCAAATTGTTCAGGGTTAGAGGTGGATGCAAAGAAGACAAAAGAATCTGGGAACAAAGAGGGAGAGGCAATTGATAATCAAGATTGCAAATTTTCTATAGGAGATTTGGTATGGGTCAAAACCAAAAGTGAGAGTTGGTGGCCTGGTCAGATTTGTGATCCTATGGATGTGTCAAAGTATGTGGCAAAGTGCAGCTCGGGCCACAGCTTCTTGGTTGGGTACTTTGGGAATGGAAAGTTTGATTGGTGCAGTCCATCTCAGTTAAAACCTCTTCATGAAGACTTTGAACAGATGTCAGGGCAAACCAACTCTAGAAGTTTCCTTGGAGCCGTTGAGAAGGCTGTCAATGAGATTGGTAGGCATGTGAAGTTGGAGATGACTTGTTCTTGCATTTTGAAAAAGAGTAGGACTGAACTTCCTAGTCTGTTGGCTGGTAATTCTGGAGTGAAGGAAGAACTGTCTGTGCCAGAGCACAAAATGTGTGATTTAGTTGCTCCCTTTGAACCTGCAAAGTTTCTTGCACATCTGAAAAATCTTGCCCGAGTTGTTTCTATGTCTAGCATGCTTGAATTTGCTGTTTTGAAGAGTCGTTTATCTGCATTTTACTGTTCAATAGGCCATTGTCAATTGTCTATGCGTCAGCTCCGGGGAACGAATGATATAGAAGACAGTGCTGGGGATGAGTTGACAGCCAGAAGCAATGTTGATGACCAAATTAGAGAACAAAATCAAGATGGGTTTGGCAAAACTCCCTCAACATCACTGCAGAAGGAATCAGAGAATTTGCAGGATAAAGTTTCTCATACAAAGAAAACTGTTGGCCCTGCTAAGATTTCACGACAGGATATGGATGTTGTACAGGAGAACCACAGAAAGGATGTTGCTGAAGAAGAAATTATATCCAACAATCCGCCATCAAAAACCAGGAAGAGAAAAAAGAGGGGAGGTTTTCAAGTTAGGAAGGAATGTCATGAAGCTGAAGACGTTGGTAAATTGGCTTCTTCCTCTGAGGAGGCTGGTCTCTCAAGGTCTCCAACAACAATGGAGAACAAAGCATCAAATGTCAGAGATGGTGATAGTGGGACCGGAACAAAATCTGAAAAGGGTGTTGAATCCAGGGAAAGAAAGAAGAGCAAGTACTTATCTCCTCCCTACATAAACTTAAACTGGGGGCGTAAAGGCCCTGTTTTGGAAGATTCTGAAACAGAAGACCCCAAGGTTCCCAAAGTTTCTTGTGCTGGGGTGGGCATGAATGAGGCTTCAGAACAGCTTGGTGCACCCCCTCCAATTGTAAAATGTAGTGGCAAGGCACAGAAAAAAAGGTCCAGAAAATCTGTTAGTGAGGGAAACACTTCTGGTGATGTAGATTCAATAAATGCATCTTCTGCTGTAATGCTCTCAGAGCTTCGTTTTGCAGCTCTAGATTGTCTTTATCCAAGCGAAAGAAAGAATTTTGTTTCAATTGAGAGATTCTTTCATAGGTTCAGATGTTCAATGTATAGTGAGGCATCCCAATGTAAGATGTATGAAAATAATATAAGTGGTGAGAAAGAGGCTTTAGCAGCAGAACCCAGCTCTTTGGAGAAAGGGCCACTGGAAATTAAGCTTCCTATAAAACCTGAGCCAAAGAAGAGAAAGAAAAAGGAAAAAGTGACGCTAAAGCATTTGGCTGAACTGACTGCTGGCATACCAGATGCCAGTGGAAACCATGTGAAATCCAGCTTACTTGGAAAAGATTCTGCAGGAGATGAGTTGCGAGGTGTGAATGGGCATTCCCATAATATGCAGGAGATGAGTTGCCAATCATCCAAAGGGAAACCTGGGCGGAAGATGATGAAGAAAAAGGAAGGAACAAATTCAAAGAGATCAAAGACCAAGCCTACTCCTGGCCTATTAGATGTGAATGTTGGCATTGTTACAAGCAGTTCACTGATAAATGATTCTGGGGAGGTGAAGCCTCTTGCACCAAATGGAAAACCTGAGCCAAATAAGAGAAAGAAGGAAGGTGCAACCTCAGAGCGTCTGCATATGAAATTCACTGCTGGAATACCAGATTTGAATAGGAATAGTCCAGTACCCAGCCCATCGGTGGAAGATTTGCAAGTTATGAGCACTGTTGCACTAGATGTAAATGGAAATAATGCTAAACCCAGCCCATCAATGAAAGATCTGCCGGGAATGGGTCTGCATTCACTTGGAGTTATTCCTGAGCTGAATGGTAGGGAGGGGAAGGAAGGAGCATCTTCAAATGGTGAATTTACTGTTAGCCTACCAGAGGTTAATGGAAACATTGCTAAATTCAGTTTGATGGTAGAAGATTCGCAGGTGACAAGCCTGCTTGCACCTGGAGGTAAACTGAAGCCTAGGAAAAGAAAGAGGAAGGAAAAGGCAATGATGGAGTGCCCAGAAATCAATTGCGCTGCTAGCATACCAGACTTGAATGGAAATAGTGCTGAACCCAGCTCAACAGAAAAACATTTGCTGGAGATTAATTGCCTTTCATCTAAAGTTAAACCTGAGCGGAAGAAAAGGAGGAGAAAAGGAGAAGTTGGAAACAAAATTGTTGGTGGGATGCTGGATATAAATATGAATTATAATAAAGTGGCGAATACTGCAGAAGCTCTTGGTACCACTCTTACCTTGACATTTGCCCAGGGATCCCCCATGCCTTCAAAGGAAGCTCTGGTTGAAGCATTTTTCAAGTTTGGACCACTGAAGGAGTCAGAAACAGAGGTGTTGAAAGATTCTCCGGGTGCCCAGGTTGTCTTCATAAGATATTCTGATGCCAGAGAGGCCTTTCAGAGTTTAGAAAAATGCAGCCCATTTGGACCCGCCCTTGTCAATTACCAACTCAATCATTCCTCGGCTGCTTCTATGGCTTTGGAGCAAGATAGGAATCAGCCGGCGGCTCTAGCTTCTCAGCCTGTGGAGTCATTGAAGACCCCAGCAAGATCTTCTGGTTCAAAGCCTCCAATTGGAGAGGCACGTCCCCTTTTCTTTATTAGGCAGAATCTTGAGATGATGACCTCAATGTTGGAGAAGTCAGGGGACAATCTTTCTCCAGAGATGAGAGCCAAATTGGAGGGTGAGATTAAAGGGCTCCTTAAGAAAGTAAGCACAATGGTTGGCTCCTCTTCCTCTTCTTAG 3711 0.4365 MGEKPNAPKTLAEDPGAKALEEASGSFGFSESPTGSVSVLVEKNGGSADVDDKDNGVSNVVVATLAGTEKCLGVGQTEKCCLLNEGVVVETKVHGASDSVESQIVLPQNNEVSVEGDTSLSEVGRIGNGDEKSGIEKMVMDEEMKDCPMSPLDGVESPKKIEVSGDGISLVVEVSGPPSGVIGDNLDEANCSGLEVDAKKTKESGNKEGEAIDNQDCKFSIGDLVWVKTKSESWWPGQICDPMDVSKYVAKCSSGHSFLVGYFGNGKFDWCSPSQLKPLHEDFEQMSGQTNSRSFLGAVEKAVNEIGRHVKLEMTCSCILKKSRTELPSLLAGNSGVKEELSVPEHKMCDLVAPFEPAKFLAHLKNLARVVSMSSMLEFAVLKSRLSAFYCSIGHCQLSMRQLRGTNDIEDSAGDELTARSNVDDQIREQNQDGFGKTPSTSLQKESENLQDKVSHTKKTVGPAKISRQDMDVVQENHRKDVAEEEIISNNPPSKTRKRKKRGGFQVRKECHEAEDVGKLASSSEEAGLSRSPTTMENKASNVRDGDSGTGTKSEKGVESRERKKSKYLSPPYINLNWGRKGPVLEDSETEDPKVPKVSCAGVGMNEASEQLGAPPPIVKCSGKAQKKRSRKSVSEGNTSGDVDSINASSAVMLSELRFAALDCLYPSERKNFVSIERFFHRFRCSMYSEASQCKMYENNISGEKEALAAEPSSLEKGPLEIKLPIKPEPKKRKKKEKVTLKHLAELTAGIPDASGNHVKSSLLGKDSAGDELRGVNGHSHNMQEMSCQSSKGKPGRKMMKKKEGTNSKRSKTKPTPGLLDVNVGIVTSSSLINDSGEVKPLAPNGKPEPNKRKKEGATSERLHMKFTAGIPDLNRNSPVPSPSVEDLQVMSTVALDVNGNNAKPSPSMKDLPGMGLHSLGVIPELNGREGKEGASSNGEFTVSLPEVNGNIAKFSLMVEDSQVTSLLAPGGKLKPRKRKRKEKAMMECPEINCAASIPDLNGNSAEPSSTEKHLLEINCLSSKVKPERKKRRRKGEVGNKIVGGMLDINMNYNKVANTAEALGTTLTLTFAQGSPMPSKEALVEAFFKFGPLKESETEVLKDSPGAQVVFIRYSDAREAFQSLEKCSPFGPALVNYQLNHSSAASMALEQDRNQPAALASQPVESLKTPARSSGSKPPIGEARPLFFIRQNLEMMTSMLEKSGDNLSPEMRAKLEGEIKGLLKKVSTMVGSSSSS* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 449 486 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 1150 1173 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 755 861 - -
Vvi17g0844 1236 Pfam PWWP domain 222 304 IPR000313 -
Vvi17g0844 1236 PANTHER ALDOLASE-RELATED 51 1157 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 430 573 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 1150 1182 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 432 448 - -
Vvi17g0844 1236 SMART PWWP_4 219 280 IPR000313 -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 506 520 - -
Vvi17g0844 1236 ProSiteProfiles PWWP domain profile. 221 282 IPR000313 -
Vvi17g0844 1236 SUPERFAMILY Tudor/PWWP/MBT 216 331 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 608 645 - -
Vvi17g0844 1236 Gene3D - 209 315 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 525 548 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 847 861 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 549 568 - -
Vvi17g0844 1236 CDD PWWP 222 305 - -
Vvi17g0844 1236 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0844 Vvi-Chr17 9723081 9726791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0844 - - vvi:104882283 2330.06