Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0840 ATGTTTTTTTTTTTTTTTTTGGTATTTCATGAAGTGGTAGTTCAAAAAGTCACCCACTTTCCTTTCAAGCATCAAACGCCGAGGATCCAGATGAATATAAAAAACTTGCAAAAGGCCAGCACCCCAAGTTTCTGGTGTTTGCATGCTCGGACTCTCGAGTTTGCCCGTCTCATGTCCTCAACTTCAAGCCATGAGAAGCCTTCATGGTCAGGAACATTAGACTTCATTGATGACTGGGTCAAAATCGGTTTACCCGCCAAGGCCAAGGTGAAATCAGAGTGGGGAGATAAATCATTTGAGCAGCATTGTCAATACTGTGAAAAGGAGTCAGGGAATTCATCGCTGGTAAACCTGCTAAGTGATCCATATGCGCGAGCAGCTGTGGCTGAAAGGGATCTGAAATTGGTGGGTGGTTACTACAATTTCGTCCATGGAACTTTTGGCCTTTGGGAGGTTGATGTTGATATTGATATTGTGTGTGTAAATATAAATAAGTGGCAAAAAAAATAA 510 0.4176 MFFFFFLVFHEVVVQKVTHFPFKHQTPRIQMNIKNLQKASTPSFWCLHARTLEFARLMSSTSSHEKPSWSGTLDFIDDWVKIGLPAKAKVKSEWGDKSFEQHCQYCEKESGNSSLVNLLSDPYARAAVAERDLKLVGGYYNFVHGTFGLWEVDVDIDIVCVNINKWQKK* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0840 169 SUPERFAMILY beta-carbonic anhydrase, cab 70 155 IPR036874 GO:0004089|GO:0008270
Vvi17g0840 169 Gene3D Carbonic anhydrase 48 160 IPR036874 GO:0004089|GO:0008270
Vvi17g0840 169 PANTHER CARBONIC ANHYDRASE 72 154 IPR001765 GO:0004089|GO:0008270
Vvi17g0840 169 Pfam Carbonic anhydrase 72 146 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0840 Vvi-Chr17 9690038 9700367 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0840 K01673 - vvi:100267268 176.407