Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0833 ATGTTCAATATGCATACAGTTGATGGGCTCCATGACATAGATGAAGAGGAAAAAGAACATGCATCAGGCCTTCACAGTGAGAGGCTGGCTATTGCTTATGGCCTGCTACACACCCCCAATGGCTCACCCATTAGAATTGTGAAGAACCTTAGAGTTTGCAGAGACTGCCATGAGGTCATAAAGCTCATATCTGAGGTTTACAATAGAGATATAATAGTAAGAGATAGAGTTCGTTTCCACCATTTCAGAGAAAGGGGGTGTTCTTGCAATGACTATTGGTAA 282 0.422 MFNMHTVDGLHDIDEEEKEHASGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNRDIIVRDRVRFHHFRERGCSCNDYW* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0833 93 Pfam DYW family of nucleic acid deaminases 9 93 IPR032867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0833 Vvi-Chr17 9612383 9612664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0833 10 93 Acyl Lipid Metabolism Gene Families AT1G47580 63.095 8.60e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0833 - - vvi:100255340 180.259