Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0832 ATGGCGACTCAATCCACGCCTCCTCCCGACTCTACAACCGAAAAACCCCAAACCCCAGCTTCTGAAATCGTACAACCAAGAAATGAGGATCAGCAAGATGCCAAGGCAGCAGCTACTATTTCTCCACCATCCGTGTTTGTGAACTCAGAACCCATGCGAGAGGAACAAGTACAAAATGCTGTTAAATTTCTTTCACACCCGAAAGTTAGAGGCTCTCCAGTCATCTACCGGCGATCTTTTCTTGAGAAAAAGGGCCTCACAAAAGAGGAGATAGATGAAGCCTTTCGCCGTGTACCTGACCAATCTCCAACTGTTACAGGTGTGCAGGCAGTTAGTGCAAATCAAGATGGGCAGTTGAAGTCATCAAACATCCAACAGCAAGCCCAGGCACAAACTCTGCATCCTTCAGCAGCCACTCCTGCTGGTGTCATTTCCAAAACGGGAACCCAGTATCGATTTCACTGGTCTCATGCTTTTCTTGCTATAGGATTCCTTGCAGCTTCAGGTGCCGGAACAGCTATACTTTTTAAGAATGCTTTTATTCCTAGGTTGAAGTCCTGGATTCGCAAAATTGTATTGGAAGGGGAAAATGACATTGTGCAGAAATCTAACTCAAAACCAAGTTTGGCAGAAGAAGCAACAGCTGCCGCAAAAGCAGCTGCAGCTGCAGCTGCTGATGTGGCAAAAACAAGCCAGGAAATATTGACTTCTAAAATTGAAGAGAACAGACGACTGGAGGAATTTATGAATCTGTTAAATGTGCAAGTACAGGAAATGAAGTCAATGAGTAATGCTATTAGGAAGTTGGAAGGACCAAATAATTCAACTGGGAGACTAATTCAACAAGAAGATACTAGAGGCCTAATGACAACTTCAAAACATTTAAATGTGAATGGAAAGGCAGAATTTGACTCACGCTCAGTGAGATCTTCATCGCCACCTGCATCTTCTGAACCCTCTGTTGCACCTCACCCAAAGTCATATTTGGAGATCATGGCCATGGTCCAGAGAGGGGAGAAACCTCCTAACATTAGAGACATCAATGATTTACCCCCCAACCCTAATCAGCCACTTTCAAATCCTCGCTTGGCTCCAAGAACTAAGCCATGGGAAGTTGGACAGGTTCAATACAGCGCAGGCCATGCCTATCAGTCTCAAGTAACTGGTGAAGGTTTCAATTCCAGGGCACAAGATAATGGAGTCGGCTATCAGTTGAATGGTGACAGTTCAACTTGGTGGCAGCAAAAGAATGCCAGAATCACAGAAATTGAAACTGAAGATGAACCCAGGACCGCATCTTATACAGCAAGTAATGAGCAACCCATTCAGCGTACCTGGGTTCCTCCCCAGCCACCCCCTATTGCAATGCCAGAAGCAGCTGCAGCCATCCGACAGCCAAAATCTTCTATTCAGAGAGAATCATTAGTTAATGATCAGTCAGTATCTCGTCCTTCAGATGAAATTGATGAGTTGCAGAGGATCACAAAGATATCTGAATCTGGAGGTGTAGTTGAGATCAAAGAAGAGAGCTCAGGACTGAACTCAAGTGAGATGCAACAAGAACAAGAGTAA 1572 0.4478 MATQSTPPPDSTTEKPQTPASEIVQPRNEDQQDAKAAATISPPSVFVNSEPMREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDQSPTVTGVQAVSANQDGQLKSSNIQQQAQAQTLHPSAATPAGVISKTGTQYRFHWSHAFLAIGFLAASGAGTAILFKNAFIPRLKSWIRKIVLEGENDIVQKSNSKPSLAEEATAAAKAAAAAAADVAKTSQEILTSKIEENRRLEEFMNLLNVQVQEMKSMSNAIRKLEGPNNSTGRLIQQEDTRGLMTTSKHLNVNGKAEFDSRSVRSSSPPASSEPSVAPHPKSYLEIMAMVQRGEKPPNIRDINDLPPNPNQPLSNPRLAPRTKPWEVGQVQYSAGHAYQSQVTGEGFNSRAQDNGVGYQLNGDSSTWWQQKNARITEIETEDEPRTASYTASNEQPIQRTWVPPQPPPIAMPEAAAAIRQPKSSIQRESLVNDQSVSRPSDEIDELQRITKISESGGVVEIKEESSGLNSSEMQQEQE* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0832 523 MobiDBLite consensus disorder prediction 341 366 - -
Vvi17g0832 523 Pfam Pex14 N-terminal domain 53 97 IPR006785 -
Vvi17g0832 523 Gene3D - 45 108 IPR036388 -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 267 324 - -
Vvi17g0832 523 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 523 IPR025655 GO:0005515|GO:0005778|GO:0016560
Vvi17g0832 523 FunFam Peroxisomal membrane protein PEX14 45 107 - -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 267 317 - -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 467 482 - -
Vvi17g0832 523 Pfam Family of unknown function (DUF5572) 323 372 - -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 1 43 - -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 509 523 - -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 430 444 - -
Vvi17g0832 523 MobiDBLite consensus disorder prediction 424 523 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0832 K13343 - vvi:100253619 959.903