Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0816 ATGGAAAGCCGAGAAAACTACTCAATGAAATCAGTTTCCGAGAAATCGTTTTCCGACTCACGGTCTCAGTCTCTGATGGAGTCCCCTCACTCTCCCCTTCGATCAGAGTCTCCTTTCCGGTCAGACGAACCAGAACCGCCGGAGTGCTCGCCGGTGAACTCACCGGAAAAGCATCAGTCCAACTCCATGGTGCCAGTCGAGAAGTATTCTCCGCACTCGCCCCACCGATCTTCCCTTCAAGGGTTGCCAGGGCAGCATAATCCGACGGCTTTGCCTCGGGAGCATGCCAAGTCGCCCCTATCATCAGTGGTGACGTTTAACCGCGCTGTAAGGGATGAGATGCCGGCGGTGGTGACCAAAGTCGATCCCAGTGGTGGCCGGGACGGTTTTACCGGAGGCGGAGGAAGGGTAGAGGACGGCGGTAGGGAGCGGCGACCGCCGGGCGCAGTGACGTCGATAGTTCGGAGATCCAGAAGAGAGGATATGGTGAAGAGAGCTGAGCTAGGGTTTAGGGTTTGTGAGGTGGTGTTTTGCTTGATTTCCTTTTCGGTCATGGCTGCAGACAAGACCCAGGGTTGGAGTGGTGATTCTTTTGATCGCTACAAGGAGTACAGGTACTGTTTATCTATGACTGTTATTGCATTTGTGTATTCGGGATTCCAGGCATGTGATCTTGCATACCATTTAGTCACACAGAAACATATGTTCTCCAACCACTCCCGTTATCATCTCAATTTCTTCATGGATCAGGGTTCTATAGTGCCATCTCTAGTGAATGACAGAGCAGGCAACAAGGTTCACCAAAAGAACATGAATCACCTGACGGTTATTTGGTGA 837 0.5173 MESRENYSMKSVSEKSFSDSRSQSLMESPHSPLRSESPFRSDEPEPPECSPVNSPEKHQSNSMVPVEKYSPHSPHRSSLQGLPGQHNPTALPREHAKSPLSSVVTFNRAVRDEMPAVVTKVDPSGGRDGFTGGGGRVEDGGRERRPPGAVTSIVRRSRREDMVKRAELGFRVCEVVFCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIAFVYSGFQACDLAYHLVTQKHMFSNHSRYHLNFFMDQGSIVPSLVNDRAGNKVHQKNMNHLTVIW* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0816 278 PANTHER CASP-LIKE PROTEIN 4A4 142 250 - -
Vvi17g0816 278 MobiDBLite consensus disorder prediction 10 35 - -
Vvi17g0816 278 MobiDBLite consensus disorder prediction 53 85 - -
Vvi17g0816 278 MobiDBLite consensus disorder prediction 1 100 - -
Vvi17g0816 278 Pfam Casparian strip membrane protein domain 162 251 IPR006702 -
Vvi17g0816 278 MobiDBLite consensus disorder prediction 119 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0816 Vvi-Chr17 9300995 9304746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0816 - - vvi:100267260 486.493