Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0809 ATGGAAACAATGCGCACACCGCCATTGCTCACAACCATTCTCTTCGTATTCTTCTTGTACTTGTCATTCACATCTTTCAATGTATGTTTCGCTGAAGGAAAGTCATCCACCGGTGGCAACCCCTTTACGGCGAAAGCTTCCCTGATTCGGTATTGGAACAAACAGATATCGAACAAGCTCCCCAAACCATCTTTTCTTCTCTCAAAAGCTTCCCCACTCAATGCCGTCGACTCGGCCGTTCTCACCAAACTCGCCACCCAAAACGCTCTGTCTTCTCATCTATCATCCTTCTGCTCCTCTGCCAACTTGTTCTGTGTCTTCGACTCATCGCCCACTTCGGAAAAACAAGTCAAGGACGCTAACTTCGCTTTTTACTCCAATAGAGGATTCGCCAACTATGGCGACTCGCGAATCGGTGGTGTTGACTCGTTCAAGAATTACTCCGACGGGTTGAACATGCCCAGCGGCTCGTTCCGGCGGTACAGCGGGGACTCCACTGACCACCACGAAGAGTTCACGAGCTACGCTCGAGACGGGAACGTCGCCACCGGGAGCTTCGCCGGCTACGGCTCAGGCGCCACCGGCGGCTCCGGTGAGTTCACGAACTACGACCCACTGGTCAACGTCCCCCATCTCGAATTCACCACGTACGACCCCAACGGCAACAACCACAAACTCACGTTCGCGGCCTACACCGATGACACCAACTCCGGCACCGAGTCCTTCACCAGCTACGGCAAGAACGGCAAGAACGTCCCGGCTGAGTTCACCAGCTACGGCGACAACTCCAACATCATCGGCTCCACTTTCACAGCTTACGGCCAATTAGCCAATAGCCAAAACGACTCGTTCAAAGCTTACGGCCACTCCTCCAACAACCCACATAACAATTTCAAGAGCTACAGCCTTGGAGGCAATGCCGCAACGGATACCTTCTCAAATTACAGAGATGGAGCCAATGTGGGTGACGATTCATTTCAATCTTATGCCAGGAGTTCGAACTCTGCAGAAGTGAATTTCGCGAATTATGGGAGGACATTCAACGTAGGAAACGACACATTCAAAGAATACGGAAAAGGGTCGACGGATTCGTCGGTTGGGTTCAAAATCTACGGTTTGAATTACACATTCAAAGACTATGAAAGAAAGGGTGTAACCTTCTCTCAATACAGCCGTGCAAGTAGCAACACTACCGCTACCGCGACTACCGCGAGTGGCATTTCCGTAAATAGATGGGTCGAGCCGGGCAAATTCTTCCGCGAGTCCATGTTAAAGGAGGGGAATGTTATGGTGATGCCAGACATACGCGACAGAATGCCCGAAAGGTCGTTTTTGCCCCGCGTCATCGCGTCCAAATTACCATTTTCCTCCTCTCGTCTCCAGGAGCTCAAGGACATCTTCCACGCGCGGGACAACTCCACGATGGAGCACGTGATTGCGAACGCGCTGGAAGAGTGCGAGAGAGCTCCGAGTCGCGGCGAGACCAAGCGGTGCGTGGGTTCGGTCGAGGACATGATAGACTTCGCCGTCTCGGTCCTGGGGCACGACGTGGTGGTGAGAACCACGGAGACGACGCGTGGGTCAAAGCAGAGGGTGATGGTGGGGGAAGTCAGAGGGATCAACGGCGGAAAAGTGACTAGATCAGTATCATGCCACCAAAGCCTGTACCCCTACTTACTGTATTATTGCCACTCAGTTCCCAAGGTTAGGGTTTACGAGGTGGACATTCTTGACGTGGAGCGCAAAGAGAAGATGAATAAAGGGGTTGCCATCTGTCATATTGACACGTCAGCATGGAGTCAGAGCCATGGCGCTTTCGTGGCGCTGGGGTCCAGCCCTGGGCTCATAGAGGTGTGCCATTGGATCTTTGAGAATGACATGACATGGACGACTTCTGATTGA 1902 0.5252 METMRTPPLLTTILFVFFLYLSFTSFNVCFAEGKSSTGGNPFTAKASLIRYWNKQISNKLPKPSFLLSKASPLNAVDSAVLTKLATQNALSSHLSSFCSSANLFCVFDSSPTSEKQVKDANFAFYSNRGFANYGDSRIGGVDSFKNYSDGLNMPSGSFRRYSGDSTDHHEEFTSYARDGNVATGSFAGYGSGATGGSGEFTNYDPLVNVPHLEFTTYDPNGNNHKLTFAAYTDDTNSGTESFTSYGKNGKNVPAEFTSYGDNSNIIGSTFTAYGQLANSQNDSFKAYGHSSNNPHNNFKSYSLGGNAATDTFSNYRDGANVGDDSFQSYARSSNSAEVNFANYGRTFNVGNDTFKEYGKGSTDSSVGFKIYGLNYTFKDYERKGVTFSQYSRASSNTTATATTASGISVNRWVEPGKFFRESMLKEGNVMVMPDIRDRMPERSFLPRVIASKLPFSSSRLQELKDIFHARDNSTMEHVIANALEECERAPSRGETKRCVGSVEDMIDFAVSVLGHDVVVRTTETTRGSKQRVMVGEVRGINGGKVTRSVSCHQSLYPYLLYYCHSVPKVRVYEVDILDVERKEKMNKGVAICHIDTSAWSQSHGAFVALGSSPGLIEVCHWIFENDMTWTTSD* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0809 633 SMART BURP_2 416 632 IPR004873 -
Vvi17g0809 633 Pfam BURP domain 418 630 IPR004873 -
Vvi17g0809 633 ProSiteProfiles BURP domain profile. 418 632 IPR004873 -
Vvi17g0809 633 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 22 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0809 Vvi-Chr17 9221632 9223623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0809 - - vvi:100263873 1256.89