Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0806 ATGGAGATCATTTACGTGTCCATCTTCTTTACATACTCAGACTGGGCAAAACGCAAAAAGATCGTGATGGCTCTTCTGTGCATAGTGATCTTTGTTGCTGCCGTGGCCGGCATTACTATGGGAGCTTTCCACACTCACCATGACAGATCTATGTTTGTTGGGATTTTATGTGTTGTGTTCAATGTTGTTATGTACGCTTCACCGCTCACTGTCATGCGACGAGTCATCAGGACGAGGAGCGTCAAGTATATGCCATTCTTCTTGTCTTTGGCAAACCTCATGAATGGAATTGTTTGGCTCATTTACGCCCTCATTAAAATAGATGCCTACATAGTGATTCCCAATGCTTTGGGAACCATTTCAGGGTTGGTGCAAATGGTCCTCTACGCTGCCTTCTACAAGTCAACCCCAAGGGAAGAAGAAGAGGTGAAGAAGACACAAGAGGTTCAACTCTCCGGGATCTAA 465 0.4495 MEIIYVSIFFTYSDWAKRKKIVMALLCIVIFVAAVAGITMGAFHTHHDRSMFVGILCVVFNVVMYASPLTVMRRVIRTRSVKYMPFFLSLANLMNGIVWLIYALIKIDAYIVIPNALGTISGLVQMVLYAAFYKSTPREEEEVKKTQEVQLSGI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0806 154 PANTHER RAG1-ACTIVATING PROTEIN 1 1 146 IPR047664 -
Vvi17g0806 154 Pfam Sugar efflux transporter for intercellular exchange 52 135 IPR004316 GO:0016020
Vvi17g0806 154 Gene3D - 48 147 - -
Vvi17g0806 154 FunFam Bidirectional sugar transporter SWEET 49 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0806 Vvi-Chr17 9163260 9164179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0806 1 113 Miscellaneous Gene Families AT5G62850 59.292 2.00e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0806 K15382 - vvi:100248462 298.516