Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi17g0804 | ATGGTGAACCCCGACACAATAAGAACCATCGTCGGCATTATTGGAAATGTCATCTCTTTCGGGCTATTTGCCTCGCCTATCCCAACTTTCATACAAATTGTTAAGAAAAAAACGGTGGGAGAATTCAAGCCAGATCCCTACCTAGCAACTGTACTGAACTGCATGATGTGGGTCCTGTACGGCCTCCCATTCGTCCGTCCAGACAGCCTTCTGGTCATCACAATCAATGGCGGTGGTCTTGTCATTGAGCTCATCTACGTCACCATCTTCTTTGTGTATGCTGATTCACTAAAGCGCAAAAAGATAGCTTTGTGGCTTCTGTTTGAAGTGATCTTCATGGCCATTATAGCTGCCATTACCATGCTGCTCTTCCATGGAACCAAAAATAGATCATTGTTCGTGGGGTTATTGTGTGTTGTGTTCAATGTTATTATGTACGCTTCCCCGCTCACCGTCATGCGTCAAGTCATCCGGACGAAGAGCGTCAAGTACATGCCATTCACCTTGTCGTTGGCCAACTTCGCCAATGGGATTGTTTGGTCTATCTATGCACTCATTAAATTTGATCCCTACATCTTGATTCCCAATGGCTTGGGCTCTTTGTCTGGCGCAGTCCAACTGATCCTATACGCTACCTACTACAAGTCCACCCCAAAGGACGAGGAGGATAAGAAGCCACCCGAGGTTCAACTCTCCGGGATGTGA | 705 | 0.4667 | MVNPDTIRTIVGIIGNVISFGLFASPIPTFIQIVKKKTVGEFKPDPYLATVLNCMMWVLYGLPFVRPDSLLVITINGGGLVIELIYVTIFFVYADSLKRKKIALWLLFEVIFMAIIAAITMLLFHGTKNRSLFVGLLCVVFNVIMYASPLTVMRQVIRTKSVKYMPFTLSLANFANGIVWSIYALIKFDPYILIPNGLGSLSGAVQLILYATYYKSTPKDEEDKKPPEVQLSGM* | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi17g0804 | 234 | FunFam | Bidirectional sugar transporter SWEET | 130 | 223 | - | - | |
| Vvi17g0804 | 234 | Pfam | Sugar efflux transporter for intercellular exchange | 10 | 95 | IPR004316 | GO:0016020 | |
| Vvi17g0804 | 234 | Pfam | Sugar efflux transporter for intercellular exchange | 133 | 216 | IPR004316 | GO:0016020 | |
| Vvi17g0804 | 234 | Gene3D | - | 129 | 225 | - | - | |
| Vvi17g0804 | 234 | Gene3D | - | 6 | 99 | - | - | |
| Vvi17g0804 | 234 | PANTHER | RAG1-ACTIVATING PROTEIN 1 | 17 | 228 | IPR047664 | - | |
| Vvi17g0804 | 234 | FunFam | Bidirectional sugar transporter SWEET | 9 | 99 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi17g0804 | Vvi-Chr17 | 9117718 | 9118943 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi17g0804 | 1 | 194 | Miscellaneous Gene Families | AT5G62850 | 69.588 | 1.26e-98 | 284 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi17g0804 | K15382 | - | vvi:100244901 | 463.766 |