Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0801 ATGGGAACCGTTTCGCCTAGACACTTTGTCCTGTTTCCTTTCATGTCACAAGGCCACACCATCCCCATCCTCCACCTTGCTCGTCTCCTCCACCGCCGCCTCCTCTCCGTCACTGTCCTCACCACTCCCGCTAACTCTCCTTCAATCCGTTCCTCTCTCCTTGACACCACCATCTCCGTTGTTGATCTCCCCTTCCCGGTGAACATCCCTGGTGTTCCTCCTGGGATCGAAAGCACTGATAAACTGCCCTCCATGTCTTTCTTTGTTCCCTTTGTCACCGCCACCAAGCTCATCCAACCCCACTTCGAACAGGTAATCGCGTCCCTCCCGACTGTTCACTGCATCATCTCGGATGGGTTTCTAGGCTGGACTCAGCAGTCCGCGGACAAACTAGGAATTCCTAGAGTTCTTTTTTATGGTATGAGCAACTATGCTATGACCTTGTCTTCAATCATGCTTCGAGAAAAGCCACATGCGATGGTGAGTTCGGTCGACGAGGTCTTCTCTGTTCCGGGGCTCCCTTGGGTGAATCTCACAACCAACGACTTTGAGCCGCCCTTCAGTGAACTTGAACCCAAGGGTGCACACTTCGACTTCGTGGCGGAAACAGGCGTGGCTGCATTTAAGAGTCATGGCATGCTGGTCAACAGCTTCTACGATCTGGAACCAAGATTCAACGATTACTGGAACCAGAAGATTGGACCTAGAGCTTGGTGCGTCGGACCACTCTGCCTGGCGGAGCCACCAAGAGTCCAGACCCTACAAAAGCCGACGTGGGTGCAGTGGCTGGACGAGAAGTTGGCTCAAGGGAAGTCGGTGCTGTACGTGGCCTTCGGATCTCAGGCGGAGATGGCACCTGAGCAGTTGCATGAAATTGCGATGGGCTTGGAAAGATCAGAGGTGGCATTTTTGTGGGTTTTGAGTTCAAAAGTACAGGAGAAACACGAGTTTGTAAAAGGGTTTGAAGAGAGGCTGAAAAAGAGAAAGAATGGGTGGACCAAAGGGAGCTACTGGCACACCAGAGCGTCAAGGGGTTTATGA 1041 0.5245 MGTVSPRHFVLFPFMSQGHTIPILHLARLLHRRLLSVTVLTTPANSPSIRSSLLDTTISVVDLPFPVNIPGVPPGIESTDKLPSMSFFVPFVTATKLIQPHFEQVIASLPTVHCIISDGFLGWTQQSADKLGIPRVLFYGMSNYAMTLSSIMLREKPHAMVSSVDEVFSVPGLPWVNLTTNDFEPPFSELEPKGAHFDFVAETGVAAFKSHGMLVNSFYDLEPRFNDYWNQKIGPRAWCVGPLCLAEPPRVQTLQKPTWVQWLDEKLAQGKSVLYVAFGSQAEMAPEQLHEIAMGLERSEVAFLWVLSSKVQEKHEFVKGFEERLKKRKNGWTKGSYWHTRASRGL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0801 346 Gene3D Glycogen Phosphorylase B; 2 252 - -
Vvi17g0801 346 PANTHER GLYCOSYLTRANSFERASE 7 328 - -
Vvi17g0801 346 Gene3D Glycogen Phosphorylase B; 253 341 - -
Vvi17g0801 346 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0801 Vvi-Chr17 9097091 9098131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0801 1 327 Glycosyltransferase AT5G14860 46.377 1.04e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0801 - - vvi:100262201 654.44