Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0792 ATGGGTCGCTTCATTATTCTCACCCTTTTCCTTCTAGCAAAATTTTCAGCTTTTCAGGCACACGCAGGAAACGAAGTTCGTGATCCGATCCTCAAACCCTCGTCGCCATTTTCGTTGGCTCTTGAAACCCTGCAGAAACAAATCGGCTATACTTTTCAGAGCATTGGTCTTCTTCGCCGGGCAATGACTCACTCCTCATTCTCCGAAGAAAACAACAAAGCATTAAGCATTCTGGGTGCCAGCACTATTGAAACTTCGGTTTCTCTCCAATATCTAAAGAAAGACATTGAAGCTTCTGCAAAAGATTTGAACCGCCGCATTTCAGAGATTTCCCAAGTGGAATCCTCTTGTGCTGTTGATGCAATGCGGTTGGGGTTGCAGAAGGTGATCAGAGTTTCCCCCAAGACCAATGCTTCAACCCCTGCAGTGGTTTGTGGTGCTTTTAGAGCAATCTTTGGTGCCATCGCAATGGATACCGGGAAATCGGATGATGCAGGAAAGGTTTTCTGGAGTGTCCATGGTAGTGAGGTTGGAGGAGCTGCTGCACTGTAA 552 0.4656 MGRFIILTLFLLAKFSAFQAHAGNEVRDPILKPSSPFSLALETLQKQIGYTFQSIGLLRRAMTHSSFSEENNKALSILGASTIETSVSLQYLKKDIEASAKDLNRRISEISQVESSCAVDAMRLGLQKVIRVSPKTNASTPAVVCGAFRAIFGAIAMDTGKSDDAGKVFWSVHGSEVGGAAAL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0792 183 ProSiteProfiles Ribonuclease III family domain profile. 41 160 IPR000999 GO:0004525|GO:0006396
Vvi17g0792 183 Coils Coil 93 113 - -
Vvi17g0792 183 Gene3D Ribonuclease III domain 39 177 IPR036389 GO:0004525|GO:0006396
Vvi17g0792 183 SMART riboneu5 56 182 IPR000999 GO:0004525|GO:0006396
Vvi17g0792 183 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 39 175 - -
Vvi17g0792 183 SUPERFAMILY RNase III domain-like 34 169 IPR036389 GO:0004525|GO:0006396
Vvi17g0792 183 PANTHER RIBONUCLEASE III 33 161 IPR011907 GO:0003723|GO:0004525|GO:0006364
Vvi17g0792 183 Pfam Ribonuclease-III-like 57 162 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0792 - - vvi:100265541 351.673