Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi17g0785 | ATGACTGCAGGAGTGCTGACAGCTGGCCTAGTTAGTTTCAGACAAGGGAATTCTCGGTTAGGTCAGCTTCTCATGAGAGCCCGTGTGGTTGTCCAAGGTGCTACAGTTGCACTCATGGTTGGCACTGCTTACTATTATGGGGAAAAGATGTAA | 153 | 0.4837 | MTAGVLTAGLVSFRQGNSRLGQLLMRARVVVQGATVALMVGTAYYYGEKM* | 51 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi17g0785 | 50 | Gene3D | - | 1 | 50 | - | - | |
| Vvi17g0785 | 50 | Pfam | Hypoxia induced protein conserved region | 1 | 41 | IPR007667 | - | |
| Vvi17g0785 | 50 | ProSiteProfiles | HIG1 domain profile. | 1 | 50 | IPR007667 | - | |
| Vvi17g0785 | 50 | PANTHER | HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED | 1 | 49 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi17g0785 | Vvi-Chr17 | 8900900 | 8901052 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi17g0785 | - | - | vvi:100263814 | 98.5969 |