Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0780 ATGTTTGTGAGAAGAGTTTTTGGAAGGGCGTTGCTTGCTGCAGCCAAGTCAGAGCCTTCTGCTGCTGGTGCTGCTACAGCTAGGGCAGGATACAATCCTCTTGAGGAGTTCTTTGAGGCAGATAGAAGCCCTGATGAAGACAAACCTGTTGTCTACGGTCGAGGTTGGAAAGCTTCTGAACTGCGCCTTAAATCTTGGGATGATCTTCATAAACTATGGTATATCCTTCTGAAGGAGAAAAACATGCTGATGACTCAACGCCAGATGCTTCAATCACAGAACCTAAGATTTCCTAATCCAGAGCGTATCCCAAAGGTGAGGAAGTCGATGTGCCGAATCAAGCATGTGCTCACTGAGAGAGCAATTGAAGAACCCGATCCCAGGAGGTCTGTTGAGATGAAGAGGATGATAAATGCTTTGTGA 423 0.4634 MFVRRVFGRALLAAAKSEPSAAGAATARAGYNPLEEFFEADRSPDEDKPVVYGRGWKASELRLKSWDDLHKLWYILLKEKNMLMTQRQMLQSQNLRFPNPERIPKVRKSMCRIKHVLTERAIEEPDPRRSVEMKRMINAL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0780 140 Gene3D - 29 131 IPR038340 -
Vvi17g0780 140 CDD Ribosomal_L29_HIP 59 120 - -
Vvi17g0780 140 Pfam Mitochondrial 39-S ribosomal protein L47 (MRP-L47) 34 120 IPR010729 GO:0003735|GO:0005761|GO:0006412
Vvi17g0780 140 SUPERFAMILY Ribosomal protein L29 (L29p) 56 123 IPR036049 GO:0003735|GO:0005840|GO:0006412
Vvi17g0780 140 NCBIfam 50S ribosomal protein L29 60 120 IPR001854 GO:0003735|GO:0005840|GO:0006412
Vvi17g0780 140 PANTHER RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED 1 140 IPR010729 GO:0003735|GO:0005761|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0780 K17428 - vvi:100248410 259.61