Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0779 ATGGCAGGTGGAGGAGGCGGTGGAAAGGCAGAGGAGCCACAGCCACACCCACCAAAGGAGCAGCTACCGGGCGTTCATTTCTGCATTACCAGTCCTCCATCATGGCCCGAGGCTATCATTCTCGGTTTCCAACACTATATAGTGATGCTCGGTACAACAGTTCTCATCCCCACTGCTCTTGTTCCCCAGATGGGAGGAGGAAATGAAGAGAAAGCAAAGGTGATTCAGACACTGCTCTTTGTTGCTGGTTTGAACACATTCACCCAAACACTATTTGGAAGTAGATTACCTGCTGTGATTGGAGGCTCTTATACATTTGTTGCAGCTACAATTTCAATTATTCTGGCTGGTCGATTCAGTGATGATGGGGATCCTATACAGAAATTCAAGAGGACTATGCGGGCAATCCAAGGTGCCATGATTGTTGCTTCAACTCTTCAGATTGTCCTAGGTTTCAGTGGCCTTTGGCGTAATGTTACGAGGTTTCTAAGTCCACTTTCAGCTGTTCCTTTGGTATCTCTAGCAGGGTTTGGTCTCTATGAGTTCGGTTTTCCTGGTGTTGCCAAATGTGTGGAGATTGGACTGCCACAGCTTATCATTTTAATACTTGTCTCACAGTACATGCCACATGTGATACACTCTGGAAAAAATATATTTGACCGTTTTGCTGTTATATTCACCGTGGTGATTGTCTGGATTTATGCTCACCTACTCACGGTGGGTGGGGCTTACAATGGTGCTGCGCCAAAGACACAAGCAAGCTGTCGTACTGATCGTGCTGGACTTATAGATGCTGCTCCATGGATAAGGATTCCGTATCCCTTTCAATGGGGAGCACCTACATTTGATGCTGGAGAAGCTTTTGCCATGATGGTTACTTCATTTGTTGCTCTTGTAGAGTCCACAGGTGCTTTTATTGCGGTGTCGAGGTTCGCAAGTGCAACTCATTTGCCATCTTCCATTCTCAGCCGGGGTGTTGGTTGGCAGGGAATTGGCATTTTGTTATCTGGGTTATTTGGAACTGTGAATGGATCATCAGTATCTGTAGAAAATGCTGGTCTTTTAGCATTAACACGTGTTGGCAGCAGAAGGGTTGTTCAAATATCAGCTGGGTTCATGATTTTCTTTTCCATTCTTGGTAAATTTGGAGCAGTCTTCGCTTCAATTCCAGCACCAATTGTTGCTGCTTTGTATTGTCTTTTCTTTGCCTATGTGGGTTCAGGAGGTCTGAGCTTCCTTCAGTTCTGCAACCTGAACAGCTTCCGAACAAAGTTCATATTAGGATTCTCAATTTTTATGGGCTTTTCTGTGCCACAGTACTTCAATGAGTTCACAGCTATTAGAGGTTATGGTCCAGTTCATACTAGTGGGAGATGGTTCAATGATATGATAAATGTCCCCTTCTCATCGGAAGCATTTGTTGCGGGCTGCCTGGCATTTTTACTGGACATCACACTCCATCGGAAAGATGGCTCAGTTAGGAAAGACAGGGGTAAGCATTGGTGGGACAAGTTCCGATCCTTCAAGACTGATACAAGAAGTGAGGAATTTTATTCTTTGCCTTTCAATCTCAACAAATATTTCCCATCTGTGTAA 1596 0.4467 MAGGGGGGKAEEPQPHPPKEQLPGVHFCITSPPSWPEAIILGFQHYIVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGLNTFTQTLFGSRLPAVIGGSYTFVAATISIILAGRFSDDGDPIQKFKRTMRAIQGAMIVASTLQIVLGFSGLWRNVTRFLSPLSAVPLVSLAGFGLYEFGFPGVAKCVEIGLPQLIILILVSQYMPHVIHSGKNIFDRFAVIFTVVIVWIYAHLLTVGGAYNGAAPKTQASCRTDRAGLIDAAPWIRIPYPFQWGAPTFDAGEAFAMMVTSFVALVESTGAFIAVSRFASATHLPSSILSRGVGWQGIGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSGGLSFLQFCNLNSFRTKFILGFSIFMGFSVPQYFNEFTAIRGYGPVHTSGRWFNDMINVPFSSEAFVAGCLAFLLDITLHRKDGSVRKDRGKHWWDKFRSFKTDTRSEEFYSLPFNLNKYFPSV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0779 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vvi17g0779 531 MobiDBLite consensus disorder prediction 1 25 - -
Vvi17g0779 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 529 - -
Vvi17g0779 531 NCBIfam purine/pyrimidine permease 39 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0779 Vvi-Chr17 8799951 8806045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0779 12 531 Organic Solute Cotransporters AT5G49990 79.808 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0779 - - vvi:100243284 1056.97