Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0773 ATGGAGAAACAGGGAGGACATGTCATGGTTCTCACATATCCCGCCCAGGGCCACATAAACCCACTCCTCCAATTCTCTAAGCGCTTAGCCTCCAAAGGCCTTAAGGCAACTCTAGCCACTACCCACTACACTGTGAACTTCATTCAGTCGGATGCAGTTGGAGTTGAGGCCATTTCAGATGGTTTTGATGAGGGTGGCTTCATGCAAGCACCAAGTTTGGAGGCCTATTTGGAGTCATTTCAAGCAGTTGGTTCAAGGACTGTAGGTGAGCTCATCCTCAAGTTCAATGAGTCGGCCTCACCTGTGGACTGTCTCGTATACGACTCGATCCTTCCATGGGGTCTCAGTGTGGCTAGACAGTTTGGGATATATGGAGCTGCATTCTGGACTACTTCAGCCTCGGTCTGCTCCATGTATTGGCAACTCCGGCAGGGTGTCCTGTCTCTGCCTGTGAAGCAGGAACCAGTGCCTGTGTCCATGCCTGGCCTTCCTCCTCTCCGTTTATCCGATTTGCCAGATTTTCTTGCTCAACCTGGGCACCTCTCTGCTTATATGTCAGCCGTCATGGAACAAATTTCCACTTTAGAACAAAATGACTGGGTGTTCATGAACTCATTTGATGCGTTGGAAAGTGAGCTGGTAAAGGCCATGTCGGGACTGTGGTCAGTGGCGATGATTGGTCCGATGGTTCCATCAGCCTACTTGGATCAACAAATTGAGGGAGATACAGTTTATGGAGCCAGTCTCTGGAAGCCTACTAATGATGAGTGCTTGGGATGGCTAGAAACAAAGCCACCCAAGTCTGTAGTCTACATCTCATTTGGAAGTATGGCAGAAATCCCAGTTAAACAGGTGGAGGAAATTGCATGGGGCCTGAAAGAGAGCGATTATCATTTCATATGGGTTGTGAAGGAGTCTGAAAGTGGGAAGTTGCCAATCAACTTTCTAAACTCAATGAATGAAACAGGGTTAGTTGTGACATGGTGTAACCAACTAGAGGTCCTAGCTCACAAAGCCGTGGGTTGCTTCGTAACACATTGTGGGTGGAACTCAATACTGGAGGGGTTAAGCCTAGGTGTGCCAATGGTGGGAATGCCACAGCGGGTCGACCAGCCAACCAATGCTAAGTTCGTGGAGGATGTGTGGAGAGCAGGAGTGAGAGCTCAGAAGGATGAAGAAGGAATTGTGACACGAAAAGAACTAGAGAAATGTATTAAGGAAATTATGGTTGGAGAAAGAAGTGAGGAGATTAAGAGGAATGCCTGTATGTGGAGACAGTCAGCTAAAAGTGCAGTCAGCAAAGGTGGGAGCTCTGACAAGAACACTGATGAATTTGTAGGAGTGTTGCTGAAGAGAGGCAAGAAGAAAACTTGA 1374 0.4782 MEKQGGHVMVLTYPAQGHINPLLQFSKRLASKGLKATLATTHYTVNFIQSDAVGVEAISDGFDEGGFMQAPSLEAYLESFQAVGSRTVGELILKFNESASPVDCLVYDSILPWGLSVARQFGIYGAAFWTTSASVCSMYWQLRQGVLSLPVKQEPVPVSMPGLPPLRLSDLPDFLAQPGHLSAYMSAVMEQISTLEQNDWVFMNSFDALESELVKAMSGLWSVAMIGPMVPSAYLDQQIEGDTVYGASLWKPTNDECLGWLETKPPKSVVYISFGSMAEIPVKQVEEIAWGLKESDYHFIWVVKESESGKLPINFLNSMNETGLVVTWCNQLEVLAHKAVGCFVTHCGWNSILEGLSLGVPMVGMPQRVDQPTNAKFVEDVWRAGVRAQKDEEGIVTRKELEKCIKEIMVGERSEEIKRNACMWRQSAKSAVSKGGSSDKNTDEFVGVLLKRGKKKT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0773 457 ProSitePatterns UDP-glycosyltransferases signature. 328 371 IPR035595 -
Vvi17g0773 457 CDD GT1_Gtf-like 7 431 IPR002213 GO:0008194
Vvi17g0773 457 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 100 412 IPR002213 GO:0008194
Vvi17g0773 457 FunFam Glycosyltransferase 10 246 - -
Vvi17g0773 457 FunFam Glycosyltransferase 247 430 - -
Vvi17g0773 457 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 441 - -
Vvi17g0773 457 Gene3D Glycogen Phosphorylase B; 244 430 - -
Vvi17g0773 457 Gene3D Glycogen Phosphorylase B; 10 441 - -
Vvi17g0773 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0773 Vvi-Chr17 8768709 8770406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0773 3 451 Glycosyltransferase AT1G24100 47.186 5.64e-147 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0773 K11820 - vvi:100260432 918.687