Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0768 ATGCAGAGGAGCCGCAAGCGAAAGCAAGAGGAGTCGTCATCATGCTCAAAGGAATCTGCAACCAAATCAGCCCGAAACGACGTCGTCGTCGACCCCTACCCATCTCACCCGCGACCCACCCCTGTAGAATGTCGGGCCGTGCGGGACGACCTCTTGGCCCTCCATGGTTTTCCCCAACGATTCGAGAAGTACCGCAAGCTCAGGCTGCCCCCTCTTCCCCACACCTCTTCTCCAGGGCTCGACGGCGGTGGCGGAACTCCGGTTAAGTTGGACCCGTCTGACGGCGATGACGTGAATGGGTCCTCTCAGAAGGAAAGCGTTTTGGATGGCTTGGTCAGCATCATACTCTCACAGAATACAACAGATGTTAATTCTCAAAGGGCTTTCGCTTCTCTCAAGTCTGCTTTTCCCACCTGGCAAGATGTTCTTGCTGCTGACTCCAAAAGCATAGAGAATGCCATAAGATGTGGCGGTTTGGCTGTGACTAAGGCTTCTTGTATCAAGAAAATGCTGAGCTGTTTGCTGGAGAGAAAAGGCAAATTATGCCTTGAGTACTTGCGAGATTTAACAGTTGATGAAATCAAGACAGAGCTTTCTCATTTCAAGGGTATTGGCCCCAAAACGGTTGCATGTGTTTTAATGTTCCATCTTCAGCGAGATGATTTTCCTGTGGACACACATGTAATCCAGATTGGGAAGGCCATTGGTTGGGTTCCCGCAGTGGCAGACAGGAAAAAGGCATATCTTCATCTCAACCGACGGATCCCGGATGAGCTAAAATTTGACCTTAACTGTCTTCTTTTCACACATGGCAAACTCTGCCATGAATGTACCCAAAAAGGGGCCAACCAGAAAAGAAAGGAATCCCATGAGAGCTCTTGTCCTCTGTTAACTTACTGTGGTGATATGTTTAAATCCAGCAGCCCCAATTGA 933 0.493 MQRSRKRKQEESSSCSKESATKSARNDVVVDPYPSHPRPTPVECRAVRDDLLALHGFPQRFEKYRKLRLPPLPHTSSPGLDGGGGTPVKLDPSDGDDVNGSSQKESVLDGLVSIILSQNTTDVNSQRAFASLKSAFPTWQDVLAADSKSIENAIRCGGLAVTKASCIKKMLSCLLERKGKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDFPVDTHVIQIGKAIGWVPAVADRKKAYLHLNRRIPDELKFDLNCLLFTHGKLCHECTQKGANQKRKESHESSCPLLTYCGDMFKSSSPN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0768 310 SUPERFAMILY DNA-glycosylase 104 300 IPR011257 GO:0003824|GO:0006281
Vvi17g0768 310 MobiDBLite consensus disorder prediction 1 15 - -
Vvi17g0768 310 SMART endo3end 116 273 IPR003265 GO:0006284
Vvi17g0768 310 Pfam HhH-GPD superfamily base excision DNA repair protein 112 255 IPR003265 GO:0006284
Vvi17g0768 310 MobiDBLite consensus disorder prediction 1 43 - -
Vvi17g0768 310 CDD ENDO3c 111 271 IPR003265 GO:0006284
Vvi17g0768 310 PANTHER - 3 305 - -
Vvi17g0768 310 Gene3D Hypothetical protein; domain 2 101 223 - -
Vvi17g0768 310 Gene3D - 95 274 IPR023170 -
Vvi17g0768 310 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0768 Vvi-Chr17 8704631 8728621 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0768 K10773 - vvi:100257083 611.298