Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0766 ATGTCTCGGCCCCAGGTCACCATCACTCTGGGCCGTACTGGTCAGGTGGTGAAGAGGGCGGGAAACGTACCTGACGGCTCTCGATTTGATTCTTTGCCTTCAGCTGGAAGCAAGAGATCCACGAGGGATGGGGCTGGAGGTAATGCCGAGAGTTCCCTCTATGAGACGCAATCCAAGACTAAGCGACATCGGGGAGATAGAAGTGTTTGGAGTTCAAATGATGCTCGGGTTGGTCGAAATGATCTTCGTTTCAAACTCATGCAAAAAAACAAGTTTAGGCGAACAAGGGGTGACTATGAAGGAAGAAATCACACGGGCCTTAAGAGACAATTGCCAAGGGCCGTTTATCCTCCTGTCAATATGTATACACTGCAGCGCATGCCTGAATCAAAGGTTAATGGCCTTTTAAGACGAATTCCTCCCACAAGAAGTGCAGATGATTTGCTCCAGTTGAACTCATCAAGAAAATCATATTCCACGTGGACTCATAATGGGTTAAGATGTAGATCTCCAGACAGAATTTTGAGTGCTTCTAGAGGCTTCTCACCACCGGGAAATATAAACGACCAGCAGCAAGTACTGACATTTAGGCCAATTGATTCCTCAAGAGCTGCTGCATATATGGCCACAAAGCAGGTTTCACGACTTCCTCCACCAAATAGCATTGCTCAGAAAAATTCCTATTTGGGAGTGGAACCACTCACCGTTGCTAGCTTCTTACATTCACTGGGTTTGGGGAAATATATCATCCTTTTTCAGGCTGAGGAAATAGACATGACTGCACTAAAGCAAATGCGGGACAATGACCTGAAGGAGTTGGGAATACCAATGGGACCAAGGAAGAAGATCCTCCTTGCTCTCAGTCCTCATTCCAAACAAGTGTAG 885 0.4644 MSRPQVTITLGRTGQVVKRAGNVPDGSRFDSLPSAGSKRSTRDGAGGNAESSLYETQSKTKRHRGDRSVWSSNDARVGRNDLRFKLMQKNKFRRTRGDYEGRNHTGLKRQLPRAVYPPVNMYTLQRMPESKVNGLLRRIPPTRSADDLLQLNSSRKSYSTWTHNGLRCRSPDRILSASRGFSPPGNINDQQQVLTFRPIDSSRAAAYMATKQVSRLPPPNSIAQKNSYLGVEPLTVASFLHSLGLGKYIILFQAEEIDMTALKQMRDNDLKELGIPMGPRKKILLALSPHSKQV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0766 294 Gene3D - 234 294 IPR013761 -
Vvi17g0766 294 ProSiteProfiles SAM domain profile. 231 285 IPR001660 GO:0005515
Vvi17g0766 294 MobiDBLite consensus disorder prediction 18 72 - -
Vvi17g0766 294 PANTHER SCP160 197 292 - -
Vvi17g0766 294 SUPERFAMILY SAM/Pointed domain 232 288 IPR013761 -
Vvi17g0766 294 Pfam SAM domain (Sterile alpha motif) 234 287 IPR001660 GO:0005515
Vvi17g0766 294 MobiDBLite consensus disorder prediction 56 70 - -
Vvi17g0766 294 SMART SAM_4 228 293 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0766 Vvi-Chr17 8692168 8697831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0766 235 287 Glycosyltransferase AT3G07170 67.925 5.33e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0766 - - vvi:100267308 587.8