Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0764 ATGTTGGTTTGGCGTGGCAAAGTTCCTGGTGTGTCGTCTCCACTCTCTGTGGGAACTTTCGTCAAACAGGTTACCACCTCAATATCGACAAGGTTTCGACCTCACAGAATCGCCACTAAAACCCTAACTACCACCAAAGTCCTTAACTCCTCTTATTTCGAAACCCTAAATCCTCTCCAGAAGCAACAAATTTCTCTCTACGTCGATGCTCTTCTTCAATGGAACCAGAAAATGAATCTGACTGCTGTTACGAAGGCAGATGAGGTCATGGAAAGGCACGTTGGTGACTCGCTTGCGATGATACCTCCCATACAGAGCTCTTATATCGCGCATTGTGACAGTTCATGCAATAATATTAGCCTTGTGGATGTGGGAAGCGGTCCGGGGCTTCCTGGTTTAATCTTAGCTATAGCCTGTCCCAGTTGGAAAATAACACTTTTGGAATCTATGAACAAGCGTTGCATTTTCTTGGAGCATGCAGTCAGTTTAACTGGTTTGTCAAATGTGCAAGTTGTAAGAGGGAGAGCAGAGAATTTGGGACAAAACATTGGCTTCAGAGAAGTATTTGATGTAGCAGTAGCCAGAGCAGTCGCAGAAATGAGGATTTTAGCTGAGTACTGTCTTCCTCTAGTTCGTGTGGGTGGTTTGTTTCTAGCTGCGAAAGGTCATGATCCCCAAGAAGAAGTTAGAAATGCAGAAAGAGCAATTCAATTGATGGGTGCATCTGTCTTACAACTATGCTCAGTGGAATCACACAGCCCATTTGGACAGCGAACCGCGATCGTATGTTTAAAAGATTGCCCCACCCCAAGGAAGTATCCCCGTGATCCAGGTACACCAGTGAAATCACCACTGTAA 858 0.451 MLVWRGKVPGVSSPLSVGTFVKQVTTSISTRFRPHRIATKTLTTTKVLNSSYFETLNPLQKQQISLYVDALLQWNQKMNLTAVTKADEVMERHVGDSLAMIPPIQSSYIAHCDSSCNNISLVDVGSGPGLPGLILAIACPSWKITLLESMNKRCIFLEHAVSLTGLSNVQVVRGRAENLGQNIGFREVFDVAVARAVAEMRILAEYCLPLVRVGGLFLAAKGHDPQEEVRNAERAIQLMGASVLQLCSVESHSPFGQRTAIVCLKDCPTPRKYPRDPGTPVKSPL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0764 285 NCBIfam 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 65 251 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vvi17g0764 285 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 12 285 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vvi17g0764 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 285 IPR029063 -
Vvi17g0764 285 Pfam rRNA small subunit methyltransferase G 60 249 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vvi17g0764 285 FunFam Ribosomal RNA small subunit methyltransferase G 40 285 - -
Vvi17g0764 285 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 53 262 IPR003682 GO:0005737|GO:0006364|GO:0008649
Vvi17g0764 285 Gene3D Vaccinia Virus protein VP39 39 285 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0764 K03501 - vvi:100262143 569.311