Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0762 ATGATTAGCAATCATCCTTCTTCCAGTGGACATGGGGCTCCAGAAATTTTAATTACTGGGGTCACTGGGGTGGAGATTATGGCTGGTTTGCACTGGTACTTGAAGTATTGGTGTGGTTCACACATATCTTGGGATAAAACTGGTGGTGCACAACTACTTTCAGTACCTGACTCAGGCTCTTTCCCCCGTGTTCAAGAGGCTGGTATCTTGATTCAGAGACCTATTCCTTGGAACTACTACCAGAATGCTGTTACATCTAGCTATACTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATTGATTGGATGGCTCTCCAAGGCATCAATTTGCCTCTGGCATTTACGGGGCAAGAGGCCATTTGGCAGAAAGTTTTCCGGAATTTCAACATTAGCCATTTGGATTTGAAAGATTTCTTTGGAGGCCCTGCATTTCTATCATGGTCACGAATGGGAAATTTGCATGGGTGGGGTGGACCACTGCCACAAAGTTGGTTAGATCAACAATTACTTCTACAAAAGAAAATTCTTGCTAGAATGTATGAGCTTGGAATGACTCCAGTCCTTCCAGCCTTCTCTGGAAATGTTCCTGCAGCATTGAAATATATATTTCCATCAGCAAAAATAACACGCTTGGGGAATTGGTTTACTGTTGGGGGTAATCCCAGATGGTGCTGCACTTATCTTCTTGATGCAACTGATCCCTTATTCATTGAAATTGGGAAAGCTTTCATCCAGCAACAATTGAAAGAATATGGAAGGACTGGACATATATATAACTGTGATACTTTCGATGAGAACACTCCACCTGTTGATGACCCAGAATACATCTCTTCATTAGGTGCAGCAATATTTAGAGGAATGCAGAGTGGTGATAGCAATGCTATCTGGCTAATGCAGGGATGGCTGTTTTCGTATGATCCATTCTGGAGGCCTCCACAAATGAAGGCACTTCTGCATTCTGTTCCTATGGGAAGGCTGGTTGTCCTTGATCTATTTGCTGAAGTGAAGCCTATATGGATTACTTCAGAGCAGTTCTATGGTGTTCCTTACATTTGGAAAGTTACAAAATCAGGAAGACAGCAGTCGTTAAAATTCACAAATGAGAAATGCTGTTCTTTCTTTCGATCTCATTCTCCAGATTCTGAGGTGTTGTGCATGCTGCACAATTTTGCTGGGAATATTGAGATGTATGGGATTTTAGATGCAGTAGCATCTGGTCCAGTTGGTGTTGGGATGTCAATGGAGGGTATTGAACAGAATCCTGTTGTTTACGATCTCATGTCTGAAATGGCATTTCAACATAGCAAAGTTGATGTGAAGGTGTGGATTGCTCTGTATTCAACCAGACGTTATGGGAAATCCGTTCCAGAAATACAAGATGCCTGGAACATATTATATCATACAGTTTATAACTGCACAGATGGTTCCTATGACAAAAACAGAGATGTGATTGTTGCATTTCCAGATATTGATCCATCCTTTATTCCTACACCAAAATTATCCATGCCCGGAGGTTACCACCGCTATGGAAAATCAGTGTCAAGAAGAACAGTCCTAAAGGAAATAACTAATTCCTTCGAGCAACCTCATCTATGGTATTCAACTTCTGAAGTGAAAGATGCGTTGGGACTTTTTATTGCAAGTGGAGGTCAATTATTAGGAAGTAACACTTACAGGTACGACCTTGTTGACTTGACAAGGCAAGCTTTGGCAAAATATGCAAACCAACTGTTCTTAGAGGTAATAGAAGCCTATCAGCTAAATGATGTCCGCGGAGCTGCTTGCCACAGCCAGAAGTTTCTAGAACTTGTGGAAGATATGGACACTCTCTTAGCTTGCCATGACGGGTTTCTTCTAGGACCTTGGTTAGAAAGTGCCAAGCAACTAGCCCAAGATGAACAACAAGAAATACAGTTTGAATGGAACGCGAGGACTCAAATTACGATGTGGTTCGACAACACAGAGGATGAAGCAAGTCTTCTTCGGGATTATGGAAACAAGTACTGGAGTGGACTGTTACGAGATTACTATGGTCCCCGAGCAGCCATATATTTCAAATATTTATTAGAAAGTTTGGAGACTGGCAATGAATTTGCTCTGAAAGATTGGAGGAGGGAATGGATCAAGCTCACAAATGATTGGCAAAACAGCAGGAATGCTTACCCGGTGAGAAGCTCAGGAAATGCTATTGACACATCCCGACGGCTCTACAACAAATATTTGCAGGATCCTGAGATTTACGATCTCTGA 2256 0.4198 MISNHPSSSGHGAPEILITGVTGVEIMAGLHWYLKYWCGSHISWDKTGGAQLLSVPDSGSFPRVQEAGILIQRPIPWNYYQNAVTSSYTFAWWDWKRWEKEIDWMALQGINLPLAFTGQEAIWQKVFRNFNISHLDLKDFFGGPAFLSWSRMGNLHGWGGPLPQSWLDQQLLLQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFTVGGNPRWCCTYLLDATDPLFIEIGKAFIQQQLKEYGRTGHIYNCDTFDENTPPVDDPEYISSLGAAIFRGMQSGDSNAIWLMQGWLFSYDPFWRPPQMKALLHSVPMGRLVVLDLFAEVKPIWITSEQFYGVPYIWKVTKSGRQQSLKFTNEKCCSFFRSHSPDSEVLCMLHNFAGNIEMYGILDAVASGPVGVGMSMEGIEQNPVVYDLMSEMAFQHSKVDVKVWIALYSTRRYGKSVPEIQDAWNILYHTVYNCTDGSYDKNRDVIVAFPDIDPSFIPTPKLSMPGGYHRYGKSVSRRTVLKEITNSFEQPHLWYSTSEVKDALGLFIASGGQLLGSNTYRYDLVDLTRQALAKYANQLFLEVIEAYQLNDVRGAACHSQKFLELVEDMDTLLACHDGFLLGPWLESAKQLAQDEQQEIQFEWNARTQITMWFDNTEDEASLLRDYGNKYWSGLLRDYYGPRAAIYFKYLLESLETGNEFALKDWRREWIKLTNDWQNSRNAYPVRSSGNAIDTSRRLYNKYLQDPEIYDL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0762 751 Gene3D Glycosidases 74 436 - -
Vvi17g0762 751 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 9 744 IPR007781 -
Vvi17g0762 751 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 385 435 IPR024733 -
Vvi17g0762 751 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 79 356 IPR024733 -
Vvi17g0762 751 Gene3D - 438 749 - -
Vvi17g0762 751 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 12 56 IPR024240 -
Vvi17g0762 751 Gene3D - 2 67 IPR029018 -
Vvi17g0762 751 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 444 741 IPR024732 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0762 Vvi-Chr17 8646692 8660217 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0762 K01205 - vvi:100246821 1464.13