Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0758 ATGGGAAGCTCTGAGGAGAGGGTAGTTGCTGTTATCATGGTGGGTGGACCAACTAAAGGTACCAGATTCCGGCCATTGTCGTTGAATACTCCAAAGCCACTTTTCCCTTTGGCAGGACAGCCCATGGTTCATCATCCAATTTCTGGTTGTAAAAGGATTCCAAACTTAGCACAGATCTATCTAGTTGGTTTCTACGAGGAGCGCGAATTCGCACTATATGTCTCCTCAATCTCCAGTGAGCTTAGAGTTCCAGTCAGATATTTGAAGGAAGACAAACCTCATGGGTCGGCTGGTGGGCTTTATAACTTCAGAGATCTGATCATGGAAGACAACCCGTCGCATATCGTCTTGCTGAACTGTGATGTCTGCTGCAGTTTCCCCCTCCCGGAAATGCTAGAGGCACACATAAGATATGGTGGGATGGGGACCATCCTCGTAATCAAGGTTTCTGCTGAGTCAGCCAGCCAGTTTGGGGAGTTGGTAGCTGATCCAGTCACCAATGAACTCTTGCATTACACAGAGAAACCTGAAACTTTTGTAAGTGACCTGATAAATTGTGGTGTTTACATATTCACACCAGATATTTTTACCGCTATACAGGGTGTTTCCACCCAACGGAAGGAACGAGCTGATCTCAGACGTTTATCCAGTTTTGAAGCTCTCCAATCTGCAACAAGGAGTCTTCCTAAGGATTTTGTTAGATTGGATCAAGATATCCTGTCGCCTCTCGCAGGCAAGAAGCAGTTATATACATATGAGACCATGGGCTTTTGGGAACAGATCAAAACTCCAGGAATGTCTTTGAAATGTTCTGCTCTGTATCTTTCCCAATACCAGTTCACCTTTCCCAATCTTTTGGCAAGTGGGGATGGTACAAAGAGTGCCACCATTATTGGTAATGTTTATATTCATCCATCTGCAAAAGTACACCCAACTGCAAAGATTGGTCCTAATGTCTCAATTTCTGCAAATGCTCGCATTGGAGCAGGTGTAAGGCTCATAAGTTGTGTCATTCTTGATGATGTTGAAATCAAGGAAAATGCAGTCGTTATTCATGCAATTGTCGGATGGAAATCTTCAGTAGGGAAATGGTCCCGTGTTCAGGCTGGAGGAGATTACAATGCAAAACTCGGGATTACAATCCTTGGTGAAGCAGTTGCAGTGGAAGATGAAGTTGTGGTGGTTAACAGCATTGTCCTCCCCAACAAGACTCTCAATGTTAGTGTTCAGGAGGAAATAATTCTATAA 1248 0.4415 MGSSEERVVAVIMVGGPTKGTRFRPLSLNTPKPLFPLAGQPMVHHPISGCKRIPNLAQIYLVGFYEEREFALYVSSISSELRVPVRYLKEDKPHGSAGGLYNFRDLIMEDNPSHIVLLNCDVCCSFPLPEMLEAHIRYGGMGTILVIKVSAESASQFGELVADPVTNELLHYTEKPETFVSDLINCGVYIFTPDIFTAIQGVSTQRKERADLRRLSSFEALQSATRSLPKDFVRLDQDILSPLAGKKQLYTYETMGFWEQIKTPGMSLKCSALYLSQYQFTFPNLLASGDGTKSATIIGNVYIHPSAKVHPTAKIGPNVSISANARIGAGVRLISCVILDDVEIKENAVVIHAIVGWKSSVGKWSRVQAGGDYNAKLGITILGEAVAVEDEVVVVNSIVLPNKTLNVSVQEEIIL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0758 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 280 IPR029044 -
Vvi17g0758 415 Pfam Nucleotidyl transferase 10 211 IPR005835 GO:0009058
Vvi17g0758 415 Gene3D Hexapeptide repeat proteins 287 412 - -
Vvi17g0758 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Vvi17g0758 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Vvi17g0758 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Vvi17g0758 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Vvi17g0758 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0758 Vvi-Chr17 8604571 8609126 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0758 K00966 - vvi:100241648 812.757