Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0751 ATGGGAGAAACACTTGGAAATCGTATTAGATTGAGCGAAGAAATCGTGAACAGGGCTGCTTCTCAAGCCATGAGAGCTCACAATTCCGCTGGCAGGCCATTTCTTCTCGACAAAACCCGTGGCTTTGCTATTTTTGCGTTTGCTGGATCTTGGCTTCCCGATGATTGGTTTACGCACCCACCTTTTGGAGAAACAAAGATGGATGCTAGTACCTTTCCTTCTCTTCGAAGTGTAGGCAACGATGAAGTCGCTGTGGTCAACGCCTCCTTCCTCCGGCGATTCAAAGCCATCTTAGATCAGCTACCACTTGAGAGAGAGGTGCAAAAAGTAATTGCAGATAGGAGGCAAGTTGTTTTTACTGGCCACTCCTGGGGTGGTGCAATGGCCATCCTGGCAACTCTATACTTCTTGGAGAAGGCAGGGCCCAATCAGAACCCACCCCGCTGCATCACTTTCGGATCCCCCCTTGTCGGTGATCGGATCTTCGGTCATGCTGTCAGGCGGGAGAAATGGTCCGACCACTTCATCCATTTTGTGATGAGATTTGATGTTATCCCTCGTATTATGCTTGGCCCTGCATCCACTGAGCACCAACAAATTCTCAATTTCTTCAATCCCAGATCTCAATTTTACAGGGAACCCCTTGATCCTCCTTTAGGTTTCTATCTCAACGTGATGAGAAGTGCTTCCTCGGTTGCAATCCATGATGCCTGCATTCTCATGGGATGCACAAACCCGTTACTGGAAACTCTAAGGAACTTCACTGAGCTCAGCCCTTACAGACCTTTCGGGACTTACATCTTCTGCACTGGAAATGGAAAATTGGTTGTCTTAAAGAACCCGGATGCAGTTCTGCAGATACTGTTTTACTGTGCTCAGTTGAGCCAAGAAGAAGCTGCAGAGATTGCACAAAGAAGCCTACATGAACATTTGGCCTACGAAAATGAACTACAGGAGAGCTTAGGAATGCAGAATGTAGTTTATTTAGATAGTCTGGAAGACCTTCCATTGTCTTCCAATGGCGGTCCAGCCACAGTTAACATTGCCTTGAATGACCTCGGCCTGAGCCCACAAGCCAGGTTATGCCTTCGAGCTGCAGGAGGGTTTGAGAACCGAAGGTTAAGAAACCAGGTTAAGATTGATGATAATAAGCAAAAGATTAATGACGAATTAAGAAAGCTGAAAGATTACCAAGAAAAGGCCGAGACTCGCAAACTGGGTTACTACGACGCCTTCAAGCACCAAGAAGAAAAAGCTGACTTCGATGCTAATGTGAGCAGGCTTGTGCTAGCTGGTATCTGGGATGAGATCATTGAAATGTTGAGAAGGTACGAACTTCCAGATGAATTTGAGAACAGGAAAGAGTTAATAGAACTTGCAACCATATATCGCCGCATAGTTGAGCCTCTAGATATTGCCAACTACTATCGACACTTGAAGAATGAAGACACAGGAACCTACGTGACAAGGGGGAGACCAAAACGATATAGATACACCCAAAGATGGCTCGAGCATGCTGAAAATAAGCCATCTGGATCCAGGTCAGAATCCTGTTTCTGGGCTGAGCTAGAGGAGCTCTGCATTCAAACTAGCGGGAACGGATCCCTTCAAGACACTAAGCAGAAGATTCAGCAACTACAGAAAAATGTAATTGAATGGATTCATGAAGGCTCTTTAGGAAAGGATGTGTTGTTGGAGGATTCCACATTTGTTAAATGGTGGAAAACCCTCCCTTTCGAGTATAAATCAGACCCTGAATCATCTAGAATTGCGAATCTCATCCATGGGTAA 1791 0.4562 MGETLGNRIRLSEEIVNRAASQAMRAHNSAGRPFLLDKTRGFAIFAFAGSWLPDDWFTHPPFGETKMDASTFPSLRSVGNDEVAVVNASFLRRFKAILDQLPLEREVQKVIADRRQVVFTGHSWGGAMAILATLYFLEKAGPNQNPPRCITFGSPLVGDRIFGHAVRREKWSDHFIHFVMRFDVIPRIMLGPASTEHQQILNFFNPRSQFYREPLDPPLGFYLNVMRSASSVAIHDACILMGCTNPLLETLRNFTELSPYRPFGTYIFCTGNGKLVVLKNPDAVLQILFYCAQLSQEEAAEIAQRSLHEHLAYENELQESLGMQNVVYLDSLEDLPLSSNGGPATVNIALNDLGLSPQARLCLRAAGGFENRRLRNQVKIDDNKQKINDELRKLKDYQEKAETRKLGYYDAFKHQEEKADFDANVSRLVLAGIWDEIIEMLRRYELPDEFENRKELIELATIYRRIVEPLDIANYYRHLKNEDTGTYVTRGRPKRYRYTQRWLEHAENKPSGSRSESCFWAELEELCIQTSGNGSLQDTKQKIQQLQKNVIEWIHEGSLGKDVLLEDSTFVKWWKTLPFEYKSDPESSRIANLIHG* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0751 596 Gene3D alpha/beta hydrolase 21 213 IPR029058 -
Vvi17g0751 596 Coils Coil 536 556 - -
Vvi17g0751 596 Pfam Lipase (class 3) 45 189 IPR002921 GO:0006629
Vvi17g0751 596 SUPERFAMILY alpha/beta-Hydrolases 36 211 IPR029058 -
Vvi17g0751 596 Coils Coil 380 404 - -
Vvi17g0751 596 PANTHER PROTEIN EDS1-RELATED 1 584 IPR044214 GO:0006952
Vvi17g0751 596 Pfam Enhanced disease susceptibility 1 protein EP domain 393 576 IPR041266 -
Vvi17g0751 596 CDD Lipase_3 35 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0751 Vvi-Chr17 8554235 8556212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0751 22 179 Acyl Lipid Metabolism Gene Families AT5G14930 25.949 1.08e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0751 K18875 - vvi:100233033 1206.43