Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0748 ATGTCAAGCATGGAGCTCCAGAACACAGTGAAAGAAGCCCTAAACGCACTCTACCATCATCCAGACGACTCCGTTCGGATGCAAGCCGATCGTTGGCTCCAAGATTTTCAACGCACCATCGATGCTTGGCAGGTCTCCGATAATTTGCTGCATGATGCAACTAGCAATCTAGAAACTTTAATCTTTTGTTCTCAAACCCTTAGAAGCAAGGTGCAACGAGATTTTGAAGAACTACCTTCAGAAGCTTTTCGCCCATTAAGGGATTCCCTCAATACCTTATTGAAAAAATTTCACAAGGGCCCCCCTAAAGTCAGAACTCAGATTAGCATTGCGGTGGCTGCCTTGGCTGTTCATGTTCCTGCGGAAGATTGGGGAGATGGTGGCATTGTGAAGTGGCTTAGGGATGAGATGAATTCTCATCCAGAATTCATACCGGGATTTTTAGAGCTACTCATGGTTTTGCCTGAGGAAGTTTTCAACTACAAAATAGCAGCTCGTCCAGAAAGACGCCGTCAATTTGAAAAAGAACTCACTTCTGAAATGGAGGTTGCTCTGAATATCTTGACTGCTTGTTTGAATATTAATGAACTAAAAGAGCAGGTTCTTGAAGCGTTTGCTTCTTGGCTTCGGCTGAGGCATGGGATTCCTGGAGCTGTGCTTGCTTCTCACCCGCTGGTGCTTACAGCTCTCTCTAGTTTAAACTCTGAGCTACTTTCAGAGGCTTCTGTGAATGTTGTTTCGGAATTGATACACTACACGACTGCTGGAAGCTCTGGCGGTGCTTCTGTACAAATCCCATTAATCCAAGTAATTGTGCCCCAAGTCATGAATCTTAAGGTGCAGCTTAGAGATTCTTCAAAGGATGAGGAAGATGTGAAAGCTATTGGTCGTTTATTTGCTGACATGGGTGATTCATATGTTGAATTGATTGCAACTGGTTCTGATGAATCAATGTTGATAGTGCATGCATTATTAGAAGTTGCATCACATCCGGAGTATGATATTGCTTCAATGACATTTAACTTCTGGCACAATCTTCAGGTCAACTTGACTAAAAGGGATGCTTACCTGTCATTTGGTAATGAAGCATCCATTGAAGCTGAGAGAAATAGGAGGCTGCAAGTTTTTCGTTCATCATATGAGTCACTTGTATCCCTGGTTAGCTCTCGAGTTCGATATCCCGAAGATTATCAAGATCTGTCATACGAGGACCTCAAGGATTTTAAACAGACTAGATATGCTGTTGCGGATGTGTTAATCGATGCAGCATCAGTTTTAGGCGGTGAAGCAACATTGAAAATTCTTTACATGAAGCTTGTTGAGGCTGTAGCTAGCTGTGGAAATGAGGAACACAATGAGTGGCGTCCAGCAGAGGCTGCTTTATATTGTATCCGAGCTATATCAAATTACGTTTCAGTCGTTGAAGCTGAAGTAATGCCTCAGGTTATGAATATGCTTCCAAAACTTCCCCATCAACCCCAATTATTGCAGACAGTGTGCTTAACAATTGGAGCATATTCAAAATGGCTTGATGCTGCGCCAGGTGGACTCTCAATTTTTCCTTCAGTCATAGATATTCTCATGAGTGGCATGAGTATATCTGAGGACTCTGCAGCAGCTGCTGCTTTGGCATTTAAACACATCTGTGATGATTGCCGGAAAAAGCTTTGTGGATCTTTAGATGGTCTGTTCCATATATATCATAGGGCAGTGAATGGGGAAGGTAATTTTAAAGTCCCTGCTGAAGACTCGCTTCACCTGGTTGAAGCCTTAAGTATGGTTATCACAGAACTTCCTCCAGATCATGCTAAGAAAGCCCTGGAGGCATTATGCTTGCCTGTTGTTACTTCTCTACAGGAAGTTGTCAATCAAGGTCCAGAAATATTGGATAAGAAAGTTGCTCGTGAGTTTACAGTTCATATTGATCGCTTTGCATATATTTTTAGATATGTAAATCACCCTGAAGCAGTGGCAGATGCAATTCAGAGGCTTTGGCCAATTTTCAAGGCAATCTTTGATGTTCGTGCTTGGGATATGCGAACTATGGAGTCTCTTTGCCGAGCTTGCAAATATGCTGTGAGAACTTCTGGAAGGTTCATGGGAATCACAATTGGGGCTATGCTAGAGGAGATTCAAGGCCTATATCAACTACACCACCAACCATGCTTTCTTTATCTTTCTAGTGAAGTTATAAAGATATTTGGGTCTGACCCATCTTGTGCAAACTACTTAAAGAATTTGATTGAAGCGCTATTCAGCCACACAACATGTCTTCTCAAAAACATTCGGGAGTTTACTGCCAGACCGGACATAGCGGATGATTGTTTTTTGTTGGCATCTAGATGCATTCGCTATTGTCCTCAATTATTTATTCCATCAGCAGTGTTTCCATCATTAGTAGATTGTTCTATGATTGGGGTCACTGTACAACACAGAGAAGCCTCCAATTCCATATTGACCTTCTTATCCGATATCTTTGATCTTGCTAAGACTAGTCCGGGAGAACAATACCAATCTATCAGGGACACTGTGATTATTCCGCGAGGTGCCAGCATCACTAGAATTCTGATTGCCTGCTTAACAGGAGCGCTCCCAAGTTCTCGACTGGAAACGGTAACATATGCACTGCTAGCCCTAACTCGAGCATATGGGATGAAAGCAGTGGAGTGGGCAAAGGACTGCATTTCATTGGTTCCATTGACAGCGGTGACAGAGGTGGAGCGGACTAGATTTTTGCAGACATTGTCAAATGTAGCAACAGGGGCTGATATAAACACCCTAACAGTTTCGATGGAAGAGCTGTCAGATGTGTGCCGCCGGAACCGAACAGTTCAAGAGATTGTTCAGGGAGCATTAAGGCCCCATGAGTTGAACTTGGCCCCTGTATCATAG 2892 0.4308 MSSMELQNTVKEALNALYHHPDDSVRMQADRWLQDFQRTIDAWQVSDNLLHDATSNLETLIFCSQTLRSKVQRDFEELPSEAFRPLRDSLNTLLKKFHKGPPKVRTQISIAVAALAVHVPAEDWGDGGIVKWLRDEMNSHPEFIPGFLELLMVLPEEVFNYKIAARPERRRQFEKELTSEMEVALNILTACLNINELKEQVLEAFASWLRLRHGIPGAVLASHPLVLTALSSLNSELLSEASVNVVSELIHYTTAGSSGGASVQIPLIQVIVPQVMNLKVQLRDSSKDEEDVKAIGRLFADMGDSYVELIATGSDESMLIVHALLEVASHPEYDIASMTFNFWHNLQVNLTKRDAYLSFGNEASIEAERNRRLQVFRSSYESLVSLVSSRVRYPEDYQDLSYEDLKDFKQTRYAVADVLIDAASVLGGEATLKILYMKLVEAVASCGNEEHNEWRPAEAALYCIRAISNYVSVVEAEVMPQVMNMLPKLPHQPQLLQTVCLTIGAYSKWLDAAPGGLSIFPSVIDILMSGMSISEDSAAAAALAFKHICDDCRKKLCGSLDGLFHIYHRAVNGEGNFKVPAEDSLHLVEALSMVITELPPDHAKKALEALCLPVVTSLQEVVNQGPEILDKKVAREFTVHIDRFAYIFRYVNHPEAVADAIQRLWPIFKAIFDVRAWDMRTMESLCRACKYAVRTSGRFMGITIGAMLEEIQGLYQLHHQPCFLYLSSEVIKIFGSDPSCANYLKNLIEALFSHTTCLLKNIREFTARPDIADDCFLLASRCIRYCPQLFIPSAVFPSLVDCSMIGVTVQHREASNSILTFLSDIFDLAKTSPGEQYQSIRDTVIIPRGASITRILIACLTGALPSSRLETVTYALLALTRAYGMKAVEWAKDCISLVPLTAVTEVERTRFLQTLSNVATGADINTLTVSMEELSDVCRRNRTVQEIVQGALRPHELNLAPVS* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0748 963 Pfam Importin-beta N-terminal domain 29 93 IPR001494 GO:0006886|GO:0031267
Vvi17g0748 963 Gene3D - 2 939 IPR011989 -
Vvi17g0748 963 Pfam Exportin 1-like protein 101 245 IPR013598 -
Vvi17g0748 963 SUPERFAMILY ARM repeat 4 859 IPR016024 -
Vvi17g0748 963 FunFam Transportin MOS14 5 934 - -
Vvi17g0748 963 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 8 952 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0748 K15436 - vvi:100243383 1863.97