Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0743 ATGGATCAGCCCAAGCAATCGTCGCCTCAGAACCTGAAACACCGGGTTTTCACCTGCCTCACCAAGCTTTCCGACCGGGATACCCAGTCCATCGCCGCCACGGAGCTCGAGTCCATTGCTCGAACCCTCACTCAGGACCTGCTCCCGCCGTTTCTATCATGCATTCACCAGACCGACCCCTCCGACAAGTCTCCGGTCCGCAAACAATGCGTCAGACTCCTCGGAATCCTCTCTGAGACCCACGGGGATGCCCTGTCACCCTTCCTCTCGAAAATGCTCTCTAACCTTATCCGCCGACTCCGTGACCCCGACTCCGCCGTCCGATCCACATGCATCAATGCCATCTCCGCCATGTCCTCTCACATCACCAAACCTCCGTTCTCCTCCATTGTTAAGCCGCTCGCTGAAACTCTATTCACTGAGCAGGATCACAACGCGCAGATCGGCGCCTCGTTGTGCCTCGCTTCGGCGATCGACGCTGCGCCGGATCCGGATCCTGCACTGTTGCGAAGGCTGTTGCCGAGGATCGAGAAGCTCCTGAAGTGTGATAGCTTCAAAGCGAAGCCGGCGGTTTTGACTCTAATTGGAAGCATTGTCGAAGCCGGTGGTGCGACGAGTTACAATGTGGTGAAGAATTTGGTGCCTTGTGCGGTGGGATTTTTGAGCAGTGAGGACTGGGCGGCAAGGAAGGCGGCGGCAGAGGTTCTTGTGAAGCTGGCTGTGATGGAGAGAGATATGTTGTCGGAGTTCAAGTCTTCTTGTCTGAAGACATTTGAGGCTCGAAGATTCGACAAGGTGAAGGCTGTGAGAGATACTATGAATCAGATGTTGGGAGCTTGGAAGGAGATTCCTGATGTTTCCAATGATGTCTCGCCACCGCCGCAATCACAATCATCTTCCAAAGAGAATGCAAGTGATGGGCGCTACCCACTTGAGTCCAGAAATTCTTGCACTGGTGGCTCTGAAGTGCCTCTGATGAGGAAGAAATCCATTCCAACCAGTATATCGCCTCAGCTCAATAGTTCATCTGCAACCACTGTGAGGAGGAGAGGTCCTGTAGATAAATCAGGTTCAGCAATGTTCCGGAAGCTGGAGCGTAAGAAGGCTTCTGATTTGAAAGTGGAAGTTACTGCTCCTCATGCTCCCTCTGTCATGAGGATTCATGAGGATGGCCTTAAGAAGAAAGATGAGAAAGCTCCAGAAAGAGGGGAGAATGAGAAAAATAGGTTCACAAAGCCAGAAACAAGGCGAGTCCTCTTCACTAAGAATTCAGATGACAAGATGAATAAGTTTGGTGGATTCAGGTCCGGATCTCGTGTGGTTCCATGTCAAGAGGAGAATTCTGAGACTACTGTTGAAGTGAGTAACACAACTGAGGTTCCGCATAGAAACCATAAAGAGTGTGAGGATCTATCTCTGATCCGTAAGCAGCTTGTTCAGATTGAAAACCAGCAATCCAGTCTGCTAAATCTCCTCGAGAAATTCATGGGAAGCTCCCAGAATGGATTGAGATCCCTGGAGACACGTGTTCATGGCCTAGAGCTCGCATTGGACGAGATCTCATTTGACTTGGCTGTGTCAAACAGAAGGATGTCAAGCACAGACACTGCAGGAGCCACATGCTGCATGCTACCTGGTGCTGATTTTCTGAGCTCCAAGTTTTGGAGGAAAACAGAAGGCCGGGGATCAACATCAAGGTTTTCTCCTTCTCATGCCACTCAATCAGGCACTGCCATGCGCTACATAGCTGGAAAGAATGACAATGCTGGAACATTCAAGTCGGAGAACCTAAGGTTTCGGCTCCAGGGTGGTGGTGGATTTGTTGTGAATCCATTGGCCGAGATTCCCAGTGATTCAAGGGATATTTCAGAAGTCTCGTCAAATAGAATTTCAAAGAATGCTCACGAGACTGCCTAG 1917 0.505 MDQPKQSSPQNLKHRVFTCLTKLSDRDTQSIAATELESIARTLTQDLLPPFLSCIHQTDPSDKSPVRKQCVRLLGILSETHGDALSPFLSKMLSNLIRRLRDPDSAVRSTCINAISAMSSHITKPPFSSIVKPLAETLFTEQDHNAQIGASLCLASAIDAAPDPDPALLRRLLPRIEKLLKCDSFKAKPAVLTLIGSIVEAGGATSYNVVKNLVPCAVGFLSSEDWAARKAAAEVLVKLAVMERDMLSEFKSSCLKTFEARRFDKVKAVRDTMNQMLGAWKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRKKSIPTSISPQLNSSSATTVRRRGPVDKSGSAMFRKLERKKASDLKVEVTAPHAPSVMRIHEDGLKKKDEKAPERGENEKNRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRVVPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQSSLLNLLEKFMGSSQNGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEGRGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQGGGGFVVNPLAEIPSDSRDISEVSSNRISKNAHETA* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0743 638 Gene3D - 5 393 IPR011989 -
Vvi17g0743 638 MobiDBLite consensus disorder prediction 283 359 - -
Vvi17g0743 638 MobiDBLite consensus disorder prediction 618 638 - -
Vvi17g0743 638 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 7 634 IPR033337 GO:0005874|GO:0008017
Vvi17g0743 638 SUPERFAMILY ARM repeat 10 503 IPR016024 -
Vvi17g0743 638 MobiDBLite consensus disorder prediction 289 320 - -
Vvi17g0743 638 MobiDBLite consensus disorder prediction 620 638 - -
Vvi17g0743 638 FunFam TORTIFOLIA1-like protein 3 isoform A 3 358 - -
Vvi17g0743 638 MobiDBLite consensus disorder prediction 331 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0743 Vvi-Chr17 8408241 8411466 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0743 - - vvi:100263859 1185.63