Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0741 ATGGGTTCTTTCTGGTTTGGCCCTTCTGTATTTCTGTTACTCATTGTTGGATGTGCTGCAAGGCCTTTCTATCCACTCCCCAGCAAGGTGGATGCTAGAGATAGATTGCCTCTTCAGACTTCTCGACCATATAATGTTGCACATCGAGGTTCAAATGGAGAGCTTCCTGAGGAAACTGCAGCTGCATACATGAGAGCTATTGAAGAGGGTGCAGACTTCATAGAAACTGATATCCTAGCCTCTAAGGATGGTGCTCTTATATGCTTCCATGATGTTACCCTTGATGATACCACTGATATTGCAGAACACAAGGAGTTTGCAGATCGCAGAACAACCTATGAAGTTCAAGGGCTCAACACCACTGGCTGGTTCTCTGTTGATTTTACACTTGAAGAACTCAAGACATTGCGGGTGAATCAGAGGTACAAGTTTCGTGATCAACAATACAATGGAAAGTTCACTATCATTACTTTTGAAGAGTTCATTTCAATTGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATTAAAAATCCAGTATTTATCAACCAGCGTGTGAAATGGCCAGATGGTAAGAGATTTGAGGACCATTTTGTAGCAACACTTAAGAAGTATGGATACAAAGGTTCATATATGTCAGAAGATTGGCTGAAACAACCAGTATTTATCCAGTCCTTTGCTCCAACATCACTTATTTACATATCGAACCAGACGAACTTGCCTAAAATCTTCTTGATTGATGATGTCACTGTACCGACTCAGGACACCAATCAGTCATATTGGGAAATCACTTCAGACAGTTACCTTAGCTTCATTAAGCAGTATGTGGTGGGGATTGGACCTTGGAAGGATACAGTAGTTCCAGTGGTAGATAATTATTTGCAAACACCTACTGATCTTGTTGCCAAAGCACATGCCCACGACTTACAGGTACACCCATACACTTATCGGAATGAGAACCAGTTCTTACACTTCAACTTCCATCAAGACCCATATGCAGAATATGATTACTGGATAAACAAGATAGGAGTTGATGGACTCTTCACAGATTTCACTGGCAGCCTCTATAACTTTCAGGAATGGACCTCTCCTCTCTCTCAAGATGATGGTGATGATGATGGCAATGCTGCTAAATTGTTGCATAAGATTGCAACATTAGTCTCTCCCTACAGGAAGGGATGA 1188 0.4167 MGSFWFGPSVFLLLIVGCAARPFYPLPSKVDARDRLPLQTSRPYNVAHRGSNGELPEETAAAYMRAIEEGADFIETDILASKDGALICFHDVTLDDTTDIAEHKEFADRRTTYEVQGLNTTGWFSVDFTLEELKTLRVNQRYKFRDQQYNGKFTIITFEEFISIALDAPRVVGIYPEIKNPVFINQRVKWPDGKRFEDHFVATLKKYGYKGSYMSEDWLKQPVFIQSFAPTSLIYISNQTNLPKIFLIDDVTVPTQDTNQSYWEITSDSYLSFIKQYVVGIGPWKDTVVPVVDNYLQTPTDLVAKAHAHDLQVHPYTYRNENQFLHFNFHQDPYAEYDYWINKIGVDGLFTDFTGSLYNFQEWTSPLSQDDGDDDGNAAKLLHKIATLVSPYRKG* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0741 395 FunFam Glycerophosphodiester phosphodiesterase GDPD5 41 360 - -
Vvi17g0741 395 SUPERFAMILY PLC-like phosphodiesterases 42 359 IPR017946 GO:0006629|GO:0008081
Vvi17g0741 395 CDD GDPD_ScGlpQ1_like 43 354 - -
Vvi17g0741 395 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 39 370 - -
Vvi17g0741 395 Pfam Glycerophosphoryl diester phosphodiesterase family 48 355 IPR030395 GO:0006629|GO:0008081
Vvi17g0741 395 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 360 IPR017946 GO:0006629|GO:0008081
Vvi17g0741 395 ProSiteProfiles GP-PDE domain profile. 43 361 IPR030395 GO:0006629|GO:0008081
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0741 15 369 Acyl Lipid Metabolism Gene Families AT5G08030 77.465 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0741 K01126 - vvi:100260480 811.986