Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0738 ATGCATAGATATATGAAAAACAATCTCGTGAATTCAAAATGTGGATGTTGGGGTTGGATTTTTCAGGTGAAAAAAGTAATTGGAGAGAAGAAGCAAGTTGTTTTCACCGGCTACTCGTCGGGTGCTCCGGTGGCCATCCTGGCAACTCTATACCTCTTGGAGAAGTCAGAGCCCAATCAGAGCCCACCCCGCTGCGTCACTTTCGGATCCCCCCTCGTCGGTGATCGGATCTTCTGTCATGCTGTCAGGCGGGAGAAATGGTCCGACCACTTCATTCATTTTGTTATGAGATACGATGTGATCCCTCGGATTATGCTTGGCCCTTCATCCACTGAGCACAAACAAATTCTCGATTTATTCAATCCCGGATCCGAATCCTTCAGAAAACACACTGATTCTTCTTTAGGTTTATATTCCAGCGTGATGAGGAATGCATCCATGGTTGCAAACTATGATGCCTGCAATTTCATGGGATGCAAAATCCCGGCGTTGGAAACTCTAAGGAACTTCATTGAGCTCAGCCCTTACAGACCTTTCGGAACTTACATCTTCTTCAGTGGAAGTGGAAAACCGGTTGTCGTAAGGAACCCGAATGCAGTACTGCAGATGCTGTTTTACTATGCTCAGTGGAGCCAAGAAGAAGATGCAGAGGCTGCAAAAAAGGGCCTAAATGAACACTTGGCCTACCAATTAAAGAAACTACAGAGCTTAGGAAAGCAGAATGTAGTCTATCTAGATCATCTGGAAGAGCTTCCGGTGTCTTCTGATGGCAGTCCAGCCACAGTCAACACGACCTTGAATGACCTCGGCCTGAGCACACAAGCCATGCTATGCCTTCAAGCTACAGGAGAGTTGGAGAAGCGAAAGTCAAGAAACCAGGATAAGATCATTAATGATTATAAGCAAAAGATTGAAGGTGAATTAAGAAAGCTGAGTAAGTACAAGGAAAAGGCCGAGACTTGCGGACTGGGCTACTATGATTCCTTCAAGCTCCAAGAAAAAGAAGATGACTTCCAGGCTAATGTGAGCAGGCTTGTGCTAGCTGGTTACTGGGACGAGATGATGGAAATGTTAAAAGCGTATGAACTTCCGGATGAATTTGAGAAGAGCCATGACTTTATACGACTTGGAACCGATTATCGCCGCACGGTTGAGCCTCTAGATATTGCCAACTTCTATCGACACGCCAAGGATGAAGAGACAGGGTTCTACGTGAACAAGGGGACTCGACCAAAACGATATCGATACATCCAAAATTGGCTCGAGCATGCTGAAAAGAAGCCATCTGGATCCCGGTCAGAATCCTGTTTCTGGGCTGAGGTAGAGGACCTCCGCATTAAAACTAGAAGCAACGGATCCTCTCCAGAAATTAAGCAGAAGGTTCAGCAACTGGGGCAAAATCTTATTAAATGGATTGATGATGAATCTTTAGGCAAGGATGTGTTGTTGGAGAATTCCACCTTTGTTAAATGGTGGAAACCCCTTCCTCCTGAGTATAAATCAGAACCCGAATCATCTCGCATTATGAAACTCATCCATTAG 1542 0.452 MHRYMKNNLVNSKCGCWGWIFQVKKVIGEKKQVVFTGYSSGAPVAILATLYLLEKSEPNQSPPRCVTFGSPLVGDRIFCHAVRREKWSDHFIHFVMRYDVIPRIMLGPSSTEHKQILDLFNPGSESFRKHTDSSLGLYSSVMRNASMVANYDACNFMGCKIPALETLRNFIELSPYRPFGTYIFFSGSGKPVVVRNPNAVLQMLFYYAQWSQEEDAEAAKKGLNEHLAYQLKKLQSLGKQNVVYLDHLEELPVSSDGSPATVNTTLNDLGLSTQAMLCLQATGELEKRKSRNQDKIINDYKQKIEGELRKLSKYKEKAETCGLGYYDSFKLQEKEDDFQANVSRLVLAGYWDEMMEMLKAYELPDEFEKSHDFIRLGTDYRRTVEPLDIANFYRHAKDEETGFYVNKGTRPKRYRYIQNWLEHAEKKPSGSRSESCFWAEVEDLRIKTRSNGSSPEIKQKVQQLGQNLIKWIDDESLGKDVLLENSTFVKWWKPLPPEYKSEPESSRIMKLIH* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0738 513 SUPERFAMILY alpha/beta-Hydrolases 24 132 IPR029058 -
Vvi17g0738 513 Coils Coil 297 317 - -
Vvi17g0738 513 PANTHER PROTEIN EDS1-RELATED 22 504 IPR044214 GO:0006952
Vvi17g0738 513 Pfam Enhanced disease susceptibility 1 protein EP domain 310 494 IPR041266 -
Vvi17g0738 513 Pfam Lipase (class 3) 23 105 IPR002921 GO:0006629
Vvi17g0738 513 Gene3D alpha/beta hydrolase 10 248 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0738 Vvi-Chr17 8367616 8369256 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0738 22 95 Acyl Lipid Metabolism Gene Families AT5G14930 37.838 1.97e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0738 K18875 - vvi:100250236 1002.28