Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0736 ATGGGTACTTGTAACTTTCCTTCGCTTAAAAGTTTAGGCGATGACGGAGTCGCTCTGGTCAATGGGTCGTTTCTCCAGCGATTCAATGCCATCCATTCATCACTTGCCAAAAAGAGCACACAAGCCATGCTATGCCTTCAAGCTACAGGAGAGTTGGAGAAGCTAAAGTCAAGAAACCAGGATAAGATCATTAATGATTATAAGCAAAAGATTGAAGGTGAATTAAGAAAGCTGAGTAAGTACAAGGAAAAGGCCGAGACTTGCGGACTGGGCTACTATGATTCCTTCAAGCTCCAAGAAAAAGAAGATGGCTTCCAGGCTAATGTGAGCAGGCTTGTGCTAGCTGGTTACTGGGACGAGATGATGGAAATGTTAAAAGCGTATAAACTTCCGGATGAATTTGAGAAGAGCCATGACTGTATACGACTTGGAACAGATTATCGCCGCACGGTTGAGCCTCTAGATATTGCCAACTTTTATCGACACGCCAAGGATGAAGAGACAGGGTTCTACGTGAAAAAGGGGACTCGACCAAAACGATATCGATACATCCAAAATTGGCTCGAGCATGCTGAAAAGAAGCCATCTGGATCCCGCTCAGAATCCTGTTTCTGGGCTGAGGTAGAGGACCTCCGCATTAAAACTAGAAGCAACGGATCCTCTCCAGAAATTAAGCAGAAGAGAGAAAATTTGCATAGAGAGAATATGGGAGAAACACTTGATCGTATTGGATTGAGCGGAGAAGTCATTAATGCAGCTGCTTCTCTAGCCATGAAGGCTCACGATTCCACTCGCGAGCCATTTCTCCTCAAGAAACCCCGTGGCTTATCCGTTGCTGTTGTTGCATTTGCTGGATCTTGGCTTCCCGATGATTGGTGTGCGGAGACACCTTTTGGAGAAACGACGATAGATGCTGGTACCTTTCCTTCGCTTAAAAGTTTAGGCGATGACGGAGTCGCTCTGGTCAACGGGTCGTTTCTCCGGCGATTCAAGGCAATCTTAGGCCAATCATCACTTGCCGAAAAGGTGAAAAAAGTAATTGGAGAGAAGAAGCGAGTTGTTTTCACCGGCTACTCGTCGGGTGCTCCGGTGGCCATCCTGGCAACTCTATGCCTCTTGGAGAAGCCAGAGCCCAATCAGAGCCCACCCCGCTGCGTCACTTTCGGATCCCCCCTCGTCGGTGATCGGATCTTCGGTCATGCTGTCAGACGGGAGAAATGGTCCGACCACTTCGTTCATTTTGTTATGAGATACGATGTGATCCCTCGGATTATGCTTGCCCCTTCATCCACTGAGCACAAACAAATTCTCGATTTCTTCAATCCCAGATCTGAATTCTTCAGAAAACCCATTGATTCTCCTTTAGGTTTCTATTCCAGCGTGATGAGGAATGCATCCTTGGTTGCAAACTATGATGCCTGCAATCTCATGGGATGCAGAATCCCGGCGTTGGAAACTCTAAGGAACTTCATTGAGCTCAGCCCTTATAGACCTTTCGGAACTTACATCTTCTGCACGGGAAATGGAAAATTGGTTGTCGTAAGGAACTCGAATGCAGTACTGCAGATGCTGTTTTACTGTGCTCAGTGGACCCAAGAAGAAGCTGCAGGGGTTGCACAAAGAAGCCTATCTGAACACTTGGCTTACAAAGATGAAATACAAGAGAGCTTAGGAATGCAGAATGTAGTCTATCTAGATCGTCTGGAAGAGATTCCAGTGTCTTCAGATGGCAGTCCAGCCACAGTCAACACGGCCTTGAATGACCTCGGCCTGAGCCCACAAGGAAGGCTATGCCTTCAAGCTGCAGGAGAGTTGGAGAAGCGAAAGTCAAGAAATCAGGATAAGATCATTAATGATTATAAGCAAAAGATTGAAGGTGAATTAAGAGAGCTGAGAAAGTACAAGGAAAAGGCTGAGACTTGTGGACTGGGCTACTATGATTCCTTTAAGCTCAACAAATACGAAGAGGACTTTCGGGCTAATGTGAGCAGGCTTGTGCTAGCTGGTTTCTAG 2013 0.464 MGTCNFPSLKSLGDDGVALVNGSFLQRFNAIHSSLAKKSTQAMLCLQATGELEKLKSRNQDKIINDYKQKIEGELRKLSKYKEKAETCGLGYYDSFKLQEKEDGFQANVSRLVLAGYWDEMMEMLKAYKLPDEFEKSHDCIRLGTDYRRTVEPLDIANFYRHAKDEETGFYVKKGTRPKRYRYIQNWLEHAEKKPSGSRSESCFWAEVEDLRIKTRSNGSSPEIKQKRENLHRENMGETLDRIGLSGEVINAAASLAMKAHDSTREPFLLKKPRGLSVAVVAFAGSWLPDDWCAETPFGETTIDAGTFPSLKSLGDDGVALVNGSFLRRFKAILGQSSLAEKVKKVIGEKKRVVFTGYSSGAPVAILATLCLLEKPEPNQSPPRCVTFGSPLVGDRIFGHAVRREKWSDHFVHFVMRYDVIPRIMLAPSSTEHKQILDFFNPRSEFFRKPIDSPLGFYSSVMRNASLVANYDACNLMGCRIPALETLRNFIELSPYRPFGTYIFCTGNGKLVVVRNSNAVLQMLFYCAQWTQEEAAGVAQRSLSEHLAYKDEIQESLGMQNVVYLDRLEEIPVSSDGSPATVNTALNDLGLSPQGRLCLQAAGELEKRKSRNQDKIINDYKQKIEGELRELRKYKEKAETCGLGYYDSFKLNKYEEDFRANVSRLVLAGF* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0736 670 Pfam Enhanced disease susceptibility 1 protein EP domain 77 233 IPR041266 -
Vvi17g0736 670 Pfam Enhanced disease susceptibility 1 protein EP domain 630 669 IPR041266 -
Vvi17g0736 670 PANTHER PROTEIN EDS1-RELATED 238 670 IPR044214 GO:0006952
Vvi17g0736 670 Coils Coil 617 637 - -
Vvi17g0736 670 Pfam Lipase (class 3) 280 426 IPR002921 GO:0006629
Vvi17g0736 670 SUPERFAMILY alpha/beta-Hydrolases 274 442 IPR029058 -
Vvi17g0736 670 Gene3D alpha/beta hydrolase 230 465 IPR029058 -
Vvi17g0736 670 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0736 Vvi-Chr17 8312937 8334526 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0736 308 447 Acyl Lipid Metabolism Gene Families AT5G14930 30.000 4.20e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0736 K18875 - vvi:100257078 838.95