Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0734 ATGCATAGATATATGAAAAACAATCTTGTGAATTCAAAATGTGGATGTTGGGGTTGGATTTTTCAGGTAATTGGAGAGAAGAAGCAAGTTGTTTTCACCGGCTACTCGTCGGGTGCTCCGGTGGCCATCCTGGCAACTCTATACTTCTTGGAGAAGTCAGAGCCCAATCAGAGCCCACCCCGCTGCGTCACTTTCGGATCCCCCCTCGTCGGTGATCGGATCTTCGGTCATGCTGTCAGACGGGAGAAATGGTCCGACCACTTCGTTCATTTTGTTATGAGATACGATGTGATCCCTCGGATTATGCTTGCCCCTTCATCCACTGAGCACAAACAAATTCTCGATTTCTTCAATCCCAGATCTGAATTCTTCAGAAAACCCATTGATTCTCCTTTAGGTTTCTATTCCAGCGTGATGAGGAATGCATCCTTGGTTGCAAACTATGATGCCTGCAATCTCATGGGATGCAGAATCCCGGCGTTGGAAACTCTAAGGAACTTCATTGAGCTCAGCCCTTATAGACCTTTCGGAACTTACATCTTCTGCACTGGAAATGGAAAATTGGTTGTCGTAAGGAACTCGAATGCAGTATTGCAGATGCTGTTTTACTGTGCTCAGTGGACCCAAGAAGAAGCTGCAGGGGTTGCACAAAGAAGCCTATCTGAACACTTGGCTTACAAAGATGAAATACAAGAGAGCTTAGGAATGCAGAATGTAGTCTATCTAGATCGTCTGGAAGAGATTCCAGTGTCTTCAGATGGCAGTCCAGCCACAGTCAACACGGCCTTGAATGACCTCGGCCTGAGCCCACAAGGCAGGCTATGCCTTCAAGCTGCAGGAGAGTTGGAGAAGCGAAAGTCAAGAAATCAGGATAAGATCATTAATGATTATAAGCAAAAGATTGAAGGTGAATTAAGAAAGATGAGAAAGTACAAGGAAAAGGCTGAGACTTGCGGACTGGGCTACTATGATTCCTTTAAGCTCAACAAATACGAAGAGGACTTTCGGGCTAATGTGAGCAGGCTTGTGCTAGCTGGTTTCTGGGACGAGATGATGGAAATGTTAAAAGCGTATGAACTTCCGGATGACTTTGAGAAGAGCCATGACTTTATACGACTTGGAACCGATTATCGCCGCACGGTTGAGCCTCTAGATATTGCCAACTTCTATCGACACGCCAAGGATGAAGAGACAGGGTTCTACATGAAAAAGGGGACTCGACCAAAACGATATCGATACATCCAAAATTGGCTCGAGCATGCTGAAAAGAAGCCATCTGGATCCCGCTCAGAATCCTGTTTCTGGGCTGAGGTAGAGGACCTCCGCATTAAAACTAGAAGCTGTGGATCCTCTCAAGAAATTAAGCAGAAGGTTCAGCAACTGGAGAAAAATCTAATTAAATGGATTGATGATGAATCTTTAGGCAAGGATGTGTTGTTGAAGAATTCCACCTTTGTTATATGGTGGAAAGGCCTTGGTCCTGAGTATAAATCAGAACCCGAATCATCTTGCATTTCGAAACTCATCGGTGGGTAA 1536 0.4499 MHRYMKNNLVNSKCGCWGWIFQVIGEKKQVVFTGYSSGAPVAILATLYFLEKSEPNQSPPRCVTFGSPLVGDRIFGHAVRREKWSDHFVHFVMRYDVIPRIMLAPSSTEHKQILDFFNPRSEFFRKPIDSPLGFYSSVMRNASLVANYDACNLMGCRIPALETLRNFIELSPYRPFGTYIFCTGNGKLVVVRNSNAVLQMLFYCAQWTQEEAAGVAQRSLSEHLAYKDEIQESLGMQNVVYLDRLEEIPVSSDGSPATVNTALNDLGLSPQGRLCLQAAGELEKRKSRNQDKIINDYKQKIEGELRKMRKYKEKAETCGLGYYDSFKLNKYEEDFRANVSRLVLAGFWDEMMEMLKAYELPDDFEKSHDFIRLGTDYRRTVEPLDIANFYRHAKDEETGFYMKKGTRPKRYRYIQNWLEHAEKKPSGSRSESCFWAEVEDLRIKTRSCGSSQEIKQKVQQLEKNLIKWIDDESLGKDVLLKNSTFVIWWKGLGPEYKSEPESSCISKLIGG* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0734 511 Coils Coil 451 471 - -
Vvi17g0734 511 Coils Coil 294 314 - -
Vvi17g0734 511 PANTHER PROTEIN EDS1-RELATED 22 509 IPR044214 GO:0006952
Vvi17g0734 511 Gene3D alpha/beta hydrolase 2 152 IPR029058 -
Vvi17g0734 511 Pfam Enhanced disease susceptibility 1 protein EP domain 307 494 IPR041266 -
Vvi17g0734 511 Pfam Lipase (class 3) 27 103 IPR002921 GO:0006629
Vvi17g0734 511 SUPERFAMILY alpha/beta-Hydrolases 26 126 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0734 Vvi-Chr17 8265348 8266987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0734 20 124 Acyl Lipid Metabolism Gene Families AT5G14930 32.381 1.36e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0734 K18875 - vvi:100257078 999.579