Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0733 ATGGGAGAAACACTTGATCGTATTGGATTGAGCGGAGCAGTCATTAATGCAGCTGCTTCTCTAGCCATGAAGGCTCACGATTCCACTCGCGAGCCATTTCTCCTCAAGAAACCCCGTGGCTTATCCGTTGCTGTTGTTGCATTTGCTGGATCTTGGCTTCCCGATGATTGGTGTGCGGAGACACCTTTTGGAGAAACGACGATAGATGCTGGTACCTTTCCTTCGCTTAAAAGTTTAGGCGATGACGGAGTCGCTCTGGTCAACGGGTCGTTTCTCCGGCGATTCAAGGCAATCTTAGGCCAATCATCACTTGCCGAAAAGGTGAAAAAAGTAATTGGAGAGAAGAAGCGAGTTATTTTCACCGGCTACTCGTCGGGTGCTCCGGTGGCCATCCTGGCAACTCTATACCTCTTGGAGAAGTCAGAGCCCAATCAGAGCCCACCCCGCTGCGTCACTTTCGGATCCCCCCTCGTCGGTGATCGGATCTTCGGTCATGCTGTCAGGCGGGAGAAATGGTCCGACCACTTCATTCATTTTGTTATGAGATACGATGTGATCCCTCGGATTATGCTTGGCCCTTCATCCACTGAGCACAAACAAATTCTCGATTTCTTCAATCCCGGATCTGAATCCTTCAGAAAACACACTGATTCTTCTTTAGGTTTATATTCCAGCGTGATGAGGAATGCATCCATGGTTGCAAACTATGATGCCTGCAATTTCATGGGATGCAGAATCCCGGCGCTGGAAACTCTAAGGAACTTCATTGAGCTCAGCCCTTATAGACCTTTCGGAACTTACATCTTCTGCAGTGGAAGTGGAAAGCTGGTTGTCGTAAGGAACCCGAATGCAGTACTGCAGATACTGTTTTACTGTGCTCAGTGGAGCCAAGAAGAAGATGCAGAGGCTGCAAAAAAAGGCCTAAATGAACACTTGGACTACCAAAAGGAACTACAGAGCTTAGGAAAGCAGAATGTAGTCTATCTAGACCATCTGGAAGAGCTTCCGGTGTCTTCTGATGGCAGTCCAGCCACAGTCAACACGACCTTGAATGACCTCGGCCTGAGCACACAAGCCATGCTATGCCTTCAAGCTACAGGAGAGTTGGAGAAGCGAAAGTCAAGAAACCAGGATAAGATCATTAATGATTATAAGCAAAAGATTGAAGGTGAATTAAGAAAGCTGAGTGAGTATAAGGAAAAGGCCGAGACTTGCGGACAGAGCTACTATGATTCCTTCAAGCTCCAAGAAAAACCAGATGCCTTCCATGCTAATGTGAGCAGGCTTGTGCTAGCTGGTTACTGGGATGAGATGATGGAAATGTTAAAAGCGTATGAACTTCCGGATGAATTTGAGAAGAGGCAAGACTTGATACAACTTGGAACAAATTATCTCCGCATGGTTGAGCCTCTAGATATTGCGAACTTCTATCGACACGCCAAGGATGAAGAGACAGGGTTCTACGTGAAAAAGGGGACTCGACCAAAACGATACCGATACATCCAAAGTTGGCTCGAGTATGCTGAAAAGAAGCCATCTGGATCCCACTCAGAATCCTGTTTCTGGGCTGAGGTAGAGGACCTCCGCATTAAAACTAGAAGCAACGGATCCTCTCCAGAAATTAAGCAGAAGGTTCAGCAACTGGGGCAAAATCTAATTAAATGGATTGATGATGAATCTTTAGGCAAGGATGTGTTGTTGGAGAATTCCACCTTTGTTAAATGGTGGAAATCCCTTCCTCCTGAGTATAAATCAGAACCCGAATCATCTCGCATTATGAAACTCATCCATGAGAAAGATTGA 1803 0.4626 MGETLDRIGLSGAVINAAASLAMKAHDSTREPFLLKKPRGLSVAVVAFAGSWLPDDWCAETPFGETTIDAGTFPSLKSLGDDGVALVNGSFLRRFKAILGQSSLAEKVKKVIGEKKRVIFTGYSSGAPVAILATLYLLEKSEPNQSPPRCVTFGSPLVGDRIFGHAVRREKWSDHFIHFVMRYDVIPRIMLGPSSTEHKQILDFFNPGSESFRKHTDSSLGLYSSVMRNASMVANYDACNFMGCRIPALETLRNFIELSPYRPFGTYIFCSGSGKLVVVRNPNAVLQILFYCAQWSQEEDAEAAKKGLNEHLDYQKELQSLGKQNVVYLDHLEELPVSSDGSPATVNTTLNDLGLSTQAMLCLQATGELEKRKSRNQDKIINDYKQKIEGELRKLSEYKEKAETCGQSYYDSFKLQEKPDAFHANVSRLVLAGYWDEMMEMLKAYELPDEFEKRQDLIQLGTNYLRMVEPLDIANFYRHAKDEETGFYVKKGTRPKRYRYIQSWLEYAEKKPSGSHSESCFWAEVEDLRIKTRSNGSSPEIKQKVQQLGQNLIKWIDDESLGKDVLLENSTFVKWWKSLPPEYKSEPESSRIMKLIHEKD* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0733 600 SUPERFAMILY alpha/beta-Hydrolases 37 217 IPR029058 -
Vvi17g0733 600 Gene3D alpha/beta hydrolase 13 240 IPR029058 -
Vvi17g0733 600 Pfam Enhanced disease susceptibility 1 protein EP domain 394 579 IPR041266 -
Vvi17g0733 600 Pfam Lipase (class 3) 45 190 IPR002921 GO:0006629
Vvi17g0733 600 Coils Coil 381 401 - -
Vvi17g0733 600 PANTHER PROTEIN EDS1-RELATED 3 588 IPR044214 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0733 Vvi-Chr17 8239693 8241675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0733 73 207 Acyl Lipid Metabolism Gene Families AT5G14930 31.111 5.88e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0733 K18875 - vvi:100253457 1213.75