Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0728 ATGAAAATGGATATATGGATTGTTGTAGCAGCTGCCTCTGCAGTATATTTATCTAAGCAGTGGCAAAAAATTTTAAGGCACAGGGAAAATTCTTCAGAGTCATTTTGTGGGACTTCTGATTTTGAGAAACCCAATCCAGCATCCACGTGGTGGCTTCCTGACAAGAAGAGCTGTCCCTTGCGCAGTTTGGCTTGGAGAAAAAAACTAGATGAAGACATTTCTATAGAAAAAGAAAATATCTCCAAAGGGGAAGTTTCAGAAATGACCCAGTTAGATGGTACTCCAGCAGCAGAAGTGGCCTCTGCTTGTGGGGCTGATGGTGAAAACCTTGTAAGTTTGGGGAATCACAAGGATTGCAATGTACTTTTTATTTCAAGTTTGGCTAATGGATTTTCGAGAAATGACAACCTTCAAGAGAATGAGGATGGAATTAGGATGACTGGTGATATTGATAGTTCTGGTGATTCTGTACATGAACCTTCAACTGTGAATGTGGGTCCTTTTCTTGGTTTATTGAGGAAAGGAAGAGCTCTTAGAACTAAGCGGTTGCATGCACGTTTTGCTAGGCCTATAAGTTCTCTGGAAAGTTGCCTTATGGCTCAGTTATATAATGAGCATGCTGAAATGGAAGAATATGTGCTTAGTTCCTTGCAATCACCACCCGCACCAACTGTGAGGCCATTATTTACATCCGACGGAAGCAGAATTATAAACAAGGCAAGTGGTGATTCTCCCAGCATGTGGATTGGAACTGGGGATGACAATCTACACAAGGAGGCCTATTTAGAAGGTAAGGAGACTGCCATTGGTGTTCCTTCACTTCCAAAGTTAAGGTCTATGGAGCAGCCAAGGAAAATGAAACTTAAGACAGGAAGGGGGCAGAGGCAAAGATTTGGCAGTTCCAGTAAAATGATCAACAGAAAACATTTCCATTCACAAGGAGGATCACCTGATGGAATGGTTCTTTTCTGTCTTGGGATTTCGATTGGCATGATATTTTCTCAAATTTCAAATAAAAGGGAAGTAGATGAAATGAAAGAATTGTTGCAGCGGACTGAGAACTTGGTTCAGGATCTACAGGAGGAACTTGAGATGAAGGATTCATTAACCGTGAAGGAGCTAGCTAATGAGGATTACGAATCACAATATACCCATGATCATGCATTTGGTAGTGAGGCTAATGAGGATTATGAATCACAGGATGCACATGAGCATGCATGTCACAATGGGCCATCCAATAGGTTTTCCTCTGAACCGTGTGATCAGAAGGCAGAGGAAAATTCAGAATTAATGAGTAAAATTGAGGCAGAGCTTGAAGCTGAGCTTGAACGGTTGGAACTAAGCATGAATTCATCTTGTTTGGAGAGAAAATTATCCAATCTTGTTGAGCTTGATCCAGACATTGTAGCAGATGTTGCTCAGGGTGAGCTAAAAGTTGAGATGGTTGGCAGGCAAACTGGTGGCCAAGATGATTCGTACCAGGATGTGAGCAGCACATCCACAACTCACTCAGCAAACTATGCAGTCTCACCGCGTGAGTTGAGCTTGCGTTTACATGAAGTCATTCAATCAAGACTAGAGGAAAGAGTCAAAGAACTTGAGACAGAACTTCAAAATAGCAATAGGAAATTGCAATTCATGGAGTCAGAGCGCTTGACTTGTTATGAGGAGTTCGCAGACAGCATACTTGGGTCCTCTACCCAACGAACTCCAATTGCACTCCCTGTAGAAGAGAGCAACCCTATAGCCCAGCTATCAGTTGTAAATTTGCCAGAAGATGCCTATAATGAGGTTGAGGACTTCATGAAGGAAACCCAGTCAGAATCAGAGGATTTTCCATCTACGGCTTATAGAAATAACCATCAAGATGGCTTACATCAATTTGATGGAAGTGTGTTGTGGGATCATGAAGATCTCCTGAAGGTAAACCAGTCTGAGGAAGAGGATCAAGAGAGCTCACATCAAGTTGATGGAATTGCAGAATGGGGCCAGAATGGGAGGGTGGGAGATTCCATGGGATACCGCCCTACAATCAATAAGGAGAGACAAAGGAGAACATTTATACCCCAGGAGGTGAGAACATTGGAGGAGCACATCTTGATGGACAGGGAACTGAGTGGAGATGAAAATAATGACGAGGCTGATGATGAGATGAAACTACTGATACAGCAGATAGTGGAGAAAAGCCGGCAAGGTTCTCCCATAGTTTTGAACGTCCAAAGGGCATTGTTTTCAGTGGATGAAAATGAACACTGA 2256 0.426 MKMDIWIVVAAASAVYLSKQWQKILRHRENSSESFCGTSDFEKPNPASTWWLPDKKSCPLRSLAWRKKLDEDISIEKENISKGEVSEMTQLDGTPAAEVASACGADGENLVSLGNHKDCNVLFISSLANGFSRNDNLQENEDGIRMTGDIDSSGDSVHEPSTVNVGPFLGLLRKGRALRTKRLHARFARPISSLESCLMAQLYNEHAEMEEYVLSSLQSPPAPTVRPLFTSDGSRIINKASGDSPSMWIGTGDDNLHKEAYLEGKETAIGVPSLPKLRSMEQPRKMKLKTGRGQRQRFGSSSKMINRKHFHSQGGSPDGMVLFCLGISIGMIFSQISNKREVDEMKELLQRTENLVQDLQEELEMKDSLTVKELANEDYESQYTHDHAFGSEANEDYESQDAHEHACHNGPSNRFSSEPCDQKAEENSELMSKIEAELEAELERLELSMNSSCLERKLSNLVELDPDIVADVAQGELKVEMVGRQTGGQDDSYQDVSSTSTTHSANYAVSPRELSLRLHEVIQSRLEERVKELETELQNSNRKLQFMESERLTCYEEFADSILGSSTQRTPIALPVEESNPIAQLSVVNLPEDAYNEVEDFMKETQSESEDFPSTAYRNNHQDGLHQFDGSVLWDHEDLLKVNQSEEEDQESSHQVDGIAEWGQNGRVGDSMGYRPTINKERQRRTFIPQEVRTLEEHILMDRELSGDENNDEADDEMKLLIQQIVEKSRQGSPIVLNVQRALFSVDENEH* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0728 751 Coils Coil 516 550 - -
Vvi17g0728 751 Coils Coil 338 369 - -
Vvi17g0728 751 MobiDBLite consensus disorder prediction 486 506 - -
Vvi17g0728 751 Coils Coil 711 731 - -
Vvi17g0728 751 MobiDBLite consensus disorder prediction 487 506 - -
Vvi17g0728 751 PANTHER EMB|CAB62613.1 132 611 IPR040348 GO:0008356
Vvi17g0728 751 MobiDBLite consensus disorder prediction 395 429 - -
Vvi17g0728 751 Coils Coil 424 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0728 Vvi-Chr17 8188496 8195243 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0728 - - vvi:100260312 1481.08