Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0727 ATGGAAGGATTGATGAGAGTGCGAACAAATCCCATTCATCTTCATTGTGGACGACATCATTCTCCTTCTCTTCCTGCATTTCCCACATTGCAGCTACATAAAAAGTTTTATAGAAATTCATTTGGGATGATGAAACATCCCAAATCGTTCAACTCAGTAGTTGCTTCTGTTCAACCGTTAGAAGCTTCTACTCGCTTTGACAACACTTTACCATCCAAAGAGATTCTTGAACTTTGGCAAGATGCCGATGCTGTCTGCTTCGATGTGGATAGCACAGTGTGCGTGGATGAGGGCATTGATGAACTTGCAGAATTTTGTGGGGCTGGAAAGGCTGTTGCAGAATGGACTGCAAGAGCGATGGGTGGCTCTGTTCCTTTTGAGGAGGCCTTGGCTGCCAGACTGTCTCTCTTTAAGCCTTCCTTATCCCAAGTCCAGGACTTCCTTGAAAAGAGGCCCCCAAGAATTTCTCCTGGAATAGATGTGTTGGTCAAGAAGCTGAAGGCTAGGAATACCAACGTTTATCTGATCTCGGGAGGCTTTCGTCAAATGATTAATCCTGTTGCATCAATCCTGGAGATTCCACCTGAAAACATCTTTGCAAATCAACTGCTGTTTGGAAGCTCTGGGGAGTTTTTGGGGTTTGACGCTAATGAACCTACTTCAAGGAGTGGAGGGAAAGCCACAGCAGTTATGCAGATAAGGAAGGTTCATGGATACAAGAGATTAGTCATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGTAAACCAGGAGGTGCTGACTTATTCATTTGCTATGCGGGAGTTCAACTTCGCGAGGCCGTTGCATCAAAATCTGATTGGCTAGTTTTCAATTTTAAAGACCTGATAAATACCTTGGAATAA 885 0.4418 MEGLMRVRTNPIHLHCGRHHSPSLPAFPTLQLHKKFYRNSFGMMKHPKSFNSVVASVQPLEASTRFDNTLPSKEILELWQDADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRISPGIDVLVKKLKARNTNVYLISGGFRQMINPVASILEIPPENIFANQLLFGSSGEFLGFDANEPTSRSGGKATAVMQIRKVHGYKRLVMIGDGATDLEARKPGGADLFICYAGVQLREAVASKSDWLVFNFKDLINTLE* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0727 294 FunFam Phosphoserine phosphatase, chloroplastic 70 124 - -
Vvi17g0727 294 FunFam Phosphoserine phosphatase SerB 94 145 - -
Vvi17g0727 294 NCBIfam phosphoserine phosphatase SerB 76 278 IPR004469 GO:0006564|GO:0036424
Vvi17g0727 294 PANTHER PHOSPHOSERINE PHOSPHATASE 61 293 - -
Vvi17g0727 294 Gene3D - 146 293 IPR023214 -
Vvi17g0727 294 FunFam Phosphoserine phosphatase, chloroplastic 141 293 - -
Vvi17g0727 294 Pfam haloacid dehalogenase-like hydrolase 83 257 - -
Vvi17g0727 294 SUPERFAMILY HAD-like 73 294 IPR036412 -
Vvi17g0727 294 CDD HAD_PSP_eu 83 286 - -
Vvi17g0727 294 Gene3D Phosphoserine phosphatase; domain 2 95 145 - -
Vvi17g0727 294 NCBIfam HAD-IB family phosphatase 84 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0727 K01079 - vvi:100251806 592.423