Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0722 ATGGCTGCTTTAGTCTACATGGTGCTCATTTTGGCCATGGCTGGTCATTCAAGTGCTAATTGGTGTGTTTGCAAAGATGGGCTTAGCGATGCTGTCCTGCAGAAAACATTGGACTATGCATGTGGAGCTGGGGCAGACTGTGGCCCTATCCATCAAAATGGTGGTTGTTACAACCCCAACACTGTAAGAGCTCATTGTTCATATGCTGTCAACAGCTATTTCCAAAAGAAAGGTCAGGCTCAAGGAACCTGTGATTTTGCTGGCACTGCCTCTGTTGCTACATCTGATCCAAGCGCTTCTGGTTGTGTCTATCCTTCTAGCATCAGCTCTGCGGGCACCAGTACAACCCCTTCCACGACAACTCCCTCAACCACACCATCAACCACAACGCCCTCAACCACGCCATCCACTACAACACCCTCAACTACAACACCCTCAACCACTTCACCTTACACTGGGACACCTTCTACTGGGGTATATGGCGGCATTAACAGTGGTGTTGGCCCATCAGGAGCTGGCATCAACACAGACATCAGTCATGGTGGGTTTATGCTTCAAAATACTTGCATGTTCTCTTTCTTTATAACCCTCTGGTTTTCAGGCTTGATGCTTTTGTGGGGTTGA 624 0.484 MAALVYMVLILAMAGHSSANWCVCKDGLSDAVLQKTLDYACGAGADCGPIHQNGGCYNPNTVRAHCSYAVNSYFQKKGQAQGTCDFAGTASVATSDPSASGCVYPSSISSAGTSTTPSTTTPSTTPSTTTPSTTPSTTTPSTTTPSTTSPYTGTPSTGVYGGINSGVGPSGAGINTDISHGGFMLQNTCMFSFFITLWFSGLMLLWG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0722 207 PANTHER BETA-1,3 GLUCANASE 7 126 IPR044788 -
Vvi17g0722 207 Gene3D - 15 121 - -
Vvi17g0722 207 SMART X8_cls 20 104 IPR012946 -
Vvi17g0722 207 FunFam Glucan endo-1,3-beta-glucosidase 4 15 108 - -
Vvi17g0722 207 Pfam X8 domain 21 91 IPR012946 -
Vvi17g0722 207 MobiDBLite consensus disorder prediction 108 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0722 Vvi-Chr17 8111303 8115469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0722 17 105 Glycoside Hydrolase AT4G34480 48.315 8.76e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0722 - - vvi:100241539 357.836