Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0721 ATGGTTTGCTTGTCCCTGAACTCATCGGGGTGGCTCATCAAGTTTATCAAGCCCAACAGTCACTCCTCCTTGGCCTCAGAAAACTCATTGATGTCATTCCCGTTCAACGCTGCAGGCTTTGCTTTCAGGTTCTGCTTTGAAGTTCACATTGGCCATATGGGTCACGAAATTCGAACGTGCACTGGTCCAAAGAGTGGTTTCCGTAGTTCTAAACATGTTTGGAGAAAGGGGCGAGTTGAAGATGCAGTTTATTTTCCCAAATGCTTCCATCTCTGTGATCGTGTTGGAAAACCCAGAGTTGTACATGATGAGAGGTTTAACATCAAAAGAATCCCTGCCATTTTAGAGCTCTGCATTCAAGCAGGTGTAGACCTTGAAAAGTACCCTACAAAGAGAAGAGCAAGGCCTGTATATTGTATTGAAGGAAGAATTGTAGATTTTGAGCCAGAGACAGAAAAAGATGAAATGAGAAGAAATGTAGAAGCTTCTGATTTGGGGACCAAAACTGAAGAGATGGAAAGGAATTCCAATTCACATAATCCTAGTCATTTTCTCACACATTCAAATAATGGGGAGGAGAAGAGCTTGAAGGAATTAAGTACCACCACACTTGAATCATGGTTTGAGATGATATCAGGAGCGAAAAAGATTATGGAGAAGTACAGTGTGAAGACTTGTGGATATTGTCCTGAAGTTCAGGTGGGTCCCAAGGGACACAAGGTGAGAATGTGCAAAGCATCAAAGCACCAGTCTCGCAACGGTTTGCATGCTTGGCAAGAAGCAACAATAGATGATCTTGTGGGTCCCAACTATGTCTGGCATGTACAGGATCAAAATAGGCCTGCTTTGGATAACAGCCTGAAGCGGTATTATGGCAAGGCTCCAGCTGTGGTGGAGTTGTGTGTGCAGGGTGGTGCATCCATTCCAGATCAGTATAGGAGTATGATGAGATTGGACGTGGTTCCGCCTGACCGTGATGAAGTTGATCTTGTTGCTTGA 999 0.4414 MVCLSLNSSGWLIKFIKPNSHSSLASENSLMSFPFNAAGFAFRFCFEVHIGHMGHEIRTCTGPKSGFRSSKHVWRKGRVEDAVYFPKCFHLCDRVGKPRVVHDERFNIKRIPAILELCIQAGVDLEKYPTKRRARPVYCIEGRIVDFEPETEKDEMRRNVEASDLGTKTEEMERNSNSHNPSHFLTHSNNGEEKSLKELSTTTLESWFEMISGAKKIMEKYSVKTCGYCPEVQVGPKGHKVRMCKASKHQSRNGLHAWQEATIDDLVGPNYVWHVQDQNRPALDNSLKRYYGKAPAVVELCVQGGASIPDQYRSMMRLDVVPPDRDEVDLVA* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0721 332 MobiDBLite consensus disorder prediction 178 195 - -
Vvi17g0721 332 ProSiteProfiles APO domain profile. 41 127 IPR023342 GO:0003723
Vvi17g0721 332 ProSiteProfiles APO domain profile. 225 310 IPR023342 GO:0003723
Vvi17g0721 332 Pfam APO RNA-binding 177 314 IPR023342 GO:0003723
Vvi17g0721 332 Pfam APO RNA-binding 40 146 IPR023342 GO:0003723
Vvi17g0721 332 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 41 239 - -
Vvi17g0721 332 MobiDBLite consensus disorder prediction 168 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0721 Vvi-Chr17 8104554 8106302 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0721 - - vvi:100854712 610.527