Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0714 ATGGGAGAACACAAGAGACACCAGATGATGCAGAACCTATTCGGCGATCAATCAGAAGAGGAAGAAGAAGAGATCGATTCTGAGCACGAGTCCAACCCCCAACCTGGCTACATCTCTGATGAAGGAGAGGGAGGACCAGAGCCTGAGGGTGAAGGTGAAATAGAGGGGCAAGGGGAGGCAGAGGTGGAGAGTGAGGGTGAATTACGTGATGTAGACCCTGATCCTGGAGAGAGTGAGGCTGAAAGAGATCAAAGTTCTGAGGACGTAGAAGTTGGTGATCAAAGGGAGGAGAGTGAAGGAAGAGAAACTGGAAGTGATGAAAAAGAAGGATATGGTCAAAGGGTAGTAACAAGCAGGCGACGCGATGTTATTGAGAGTGGATCAGAGAGGTCTGAGGAGAACCATTATGCTGACCATGAAGATGAGGAAGTGGATCAGGCTAGAAGTCCTAGATCACCTGGAGAGGAGAAGGATCAGACTCACAATTCTCACTCTGTTGCTGAGATTCGTGATGTATTTGGTGAGTCTGATGATGAAGAAGCAGCAGAATATGCAGTTGATAATGATATTGAGCAGAATTCCATTAGATCCCCCATGGAAGAAGAAGGGAGCTATGAGAAAAACCTGAGACCAGAGGATATACTCCCTGATGAAGATGCTCAATATGGGTCAGAAGAGGAGAATGTTGAGATTAAATCTAAAGAGAAGCCTGTTGGGCCTCCTTTGGTGCTAGAGGTTCCACTACGGCGGCCTCCAGCTCACCCAGATAAGATGAACATGATAAAAGTTTCTAATATAATGGGCATTGAACCAAAGCCATTTGACCCTAAAACGTACGTAGAAGAGGACACATTTGTGACAGATGAATCTGGATCCAAGAAACGCATACGCTTGGAGAACAACATTGTCCGCTGGAGGAATGTTAAAAATCCAGATGGCACAACATCTTATGAGAGCAATGCGCGTTTTGTGAGATGGTCGGATGGCAGTTTACAGCTATTGATTGGGAATGAAGTTCTTGACATATCAGTGCAAGATGCCCAGCATGACCAATCGCACCTTTTTCTTAGACATGGAAAGGGAATTCTCCAATCACAAGGGAGAATTTTGAGAAAGATGAGATTTATGCCCTCGTCTTTGTCATCGAATTCTCACAGGTTGTTAACAGCTCTTGTTGATTCACGACATAAAAAGGTTTATAAGGTTAAGAACTGCATCACAGACATTGATCCTGAGAGGGAAAAGGAGGAAAAAGAAAAGGCTGTGAGTCAAACAATCAGAGCTAATCAACTTCTTAACCGAAAGCGGGAGAAGGTGAATCGAAAGTATACACAAACAGTGGACAGGGGGCGCCAACTGTCCCCTGGATTCTTGGAGGAAGCACTGGATGAGGATGACGAGCCGGATTATCATGATTCTCGCCGCCATCGTCGTCGGTTTGAGGATGATCTTGAAATGGATACTCGAGCTGAAAAACGTATTTTTAATGTGAAGAAGGGACATAAAGACATTCCTCGCAAATCATCCTTATCGGCTATTAAATCATCTAGGCGTCCAGTGGATTTCTCTGACAGTGAGAGAGAGGAGTCTGAGTATGAAAGCGATGGGGAGGAAGATGAGAGGTCTTTCTCCCGGAAGAGGGCAGAGGAACCAGAGGAGGAATATGCTGAAGAGGATGAAGAGGAAGATGAACGTGATGAAGAAGAGGCTGAAGCGAATGAAGAATCAGAGGAGGAGGTTGAGGAACCAAAGCAAAAGGGTAAGGAGTATGCCAAGCGCAAGGGAATTGAATCAGATGAGGACTCTCCTCCAAGAAAGACTGCTAGCCACCGGAGAATGGCATTTGTTTATGAAAGTGATGAGGACCTTAAGGAATACTTGGTCACAAACTTTGAGTAG 1899 0.4529 MGEHKRHQMMQNLFGDQSEEEEEEIDSEHESNPQPGYISDEGEGGPEPEGEGEIEGQGEAEVESEGELRDVDPDPGESEAERDQSSEDVEVGDQREESEGRETGSDEKEGYGQRVVTSRRRDVIESGSERSEENHYADHEDEEVDQARSPRSPGEEKDQTHNSHSVAEIRDVFGESDDEEAAEYAVDNDIEQNSIRSPMEEEGSYEKNLRPEDILPDEDAQYGSEEENVEIKSKEKPVGPPLVLEVPLRRPPAHPDKMNMIKVSNIMGIEPKPFDPKTYVEEDTFVTDESGSKKRIRLENNIVRWRNVKNPDGTTSYESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQSHLFLRHGKGILQSQGRILRKMRFMPSSLSSNSHRLLTALVDSRHKKVYKVKNCITDIDPEREKEEKEKAVSQTIRANQLLNRKREKVNRKYTQTVDRGRQLSPGFLEEALDEDDEPDYHDSRRHRRRFEDDLEMDTRAEKRIFNVKKGHKDIPRKSSLSAIKSSRRPVDFSDSEREESEYESDGEEDERSFSRKRAEEPEEEYAEEDEEEDERDEEEAEANEESEEEVEEPKQKGKEYAKRKGIESDEDSPPRKTASHRRMAFVYESDEDLKEYLVTNFE* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0714 632 MobiDBLite consensus disorder prediction 579 613 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 44 68 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 538 552 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 496 613 - -
Vvi17g0714 632 Pfam Leo1-like protein 260 419 IPR007149 GO:0006368|GO:0016570|GO:0016593
Vvi17g0714 632 PANTHER LEO1 PROTEIN 1 622 IPR007149 GO:0006368|GO:0016570|GO:0016593
Vvi17g0714 632 MobiDBLite consensus disorder prediction 553 578 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 69 172 - -
Vvi17g0714 632 Coils Coil 556 578 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 1 236 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 437 475 - -
Vvi17g0714 632 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0714 Vvi-Chr17 7961957 7972463 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0714 K15177 - vvi:100248444 1072.77