Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0709 ATGTCGTCACATAACAACTCGTCGCCGGCGGTGAACGATCCACGCCAGCCGTCAACGGCGAATCCGTACGTGGCTCCTATGGTACGACCAGAAGATCTACCAGTTGATTACTCAGGATTCATCGCCGTCATCTTCGCTATCGTCGGCTTAATGTTCAGGTATAAGCTTTGCTCGTGGCTTGCTATCATATTCTGTGCCCAATCACTTTCCAACATGAGGAATTTCGAAAATGATCTTAAACAGATTTCCATGGCCATGATGTTTGCAATTATGGGTTTAATGACAAACTACTTGGGCTTAGGGCCTACACGGCCAAGCACACAAGATTCCCTTCTTAGGGGTGTGATTCAGTGTCCCTTTTGGCTCAATGGGAAAGATCCCTACATATCCTATGGTGCATTGCGAAAAATCTCTACATGCCCTTCTTGA 429 0.4662 MSSHNNSSPAVNDPRQPSTANPYVAPMVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSLSNMRNFENDLKQISMAMMFAIMGLMTNYLGLGPTRPSTQDSLLRGVIQCPFWLNGKDPYISYGALRKISTCPS* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0709 142 Pfam PAT complex subunit Asterix 11 99 IPR005351 GO:0005789|GO:0044183|GO:0045048
Vvi17g0709 142 MobiDBLite consensus disorder prediction 1 23 - -
Vvi17g0709 142 PANTHER CGI-140 9 106 IPR005351 GO:0005789|GO:0044183|GO:0045048
Vvi17g0709 142 MobiDBLite consensus disorder prediction 1 19 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0709 K24963 - vvi:100246810 221.861